Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo27g01236 | ATGGCAACAAGCTCAATTCTAAAAAAAACATTAACCACATCCTTAAACCCTTACAAAACACCAATCCTAAGATCCCTATCCACCGCAGCAGCCGCCACACAACAACAACCTCAACCCGACACAGACAACAACACCTTCACTTTTTCAGACCAAACCAATAAAAATGATGAGATAATTATTAAAGGAAGGAAACCAGCACCAGCAACATCAGTAACGATGCCGATGTCGTTCATGACTGGTTCAATTGTTGGAAAGAGGTTTTATAAACAAGTGACTACCAGGGAGTCTGATGATGGTGTTGGCTGGTCTGTTATGCTTGATTACAGGACTCTTAAAACTCCGTCCAAGAGGCCCTTGAAGTGTTCGAGTTTGTTTCTCGCGAAAGCTATTGCTGCTGAATGGGATTATCAGCTCGCAGATGGAATCAGGCCATTTACAATGCCTTTAATGAAACTTGCATGTACTGCTTTGGAGAGAGTTCCCCTCATTAGGTCGAAGATTATTGATAGTTTAATGCAGAGGTTTAATCAGGATTTAGTCTTTTGTCGGGCCCCAGATGATGATGTGTTGACAAGTGGCGTCCATGAATTACAAGTGCAGAAAATTGATCCTCTTCTTAAGTGGGTAGAATCAGAGTTTGGAATTAAGCCCGTTGTATATTCCAGTTTTTTTGGGGGCAAACAGGAGGATGGTCTCGTAAAAGCTGTAGAGAACCTTCTTAAGAAAACAGATGATAATGAGTTAGCAGCAATCGATGCACTTGCTTCAGCATCACATTCATTAATAATTTCAATTGCAATCTTTCGTGGGAGACTACAAATTGATGAAGCAATTGAATTGATTAGACTTGAAGAAGATATGCAGGTTGAAAAATGGGGTCTGGTAGAAGGTGGTCACGATCTTGATGTTGCAGACCTTAAGGTGCAAATCTCATCTGCAGCGGTTTTCCTTGGACTTACAAGACGGTTTCCAAGTGGTGTGTAG | 984 | 41.36 | MATSSILKKTLTTSLNPYKTPILRSLSTAAAATQQQPQPDTDNNTFTFSDQTNKNDEIIIKGRKPAPATSVTMPMSFMTGSIVGKRFYKQVTTRESDDGVGWSVMLDYRTLKTPSKRPLKCSSLFLAKAIAAEWDYQLADGIRPFTMPLMKLACTALERVPLIRSKIIDSLMQRFNQDLVFCRAPDDDVLTSGVHELQVQKIDPLLKWVESEFGIKPVVYSSFFGGKQEDGLVKAVENLLKKTDDNELAAIDALASASHSLIISIAIFRGRLQIDEAIELIRLEEDMQVEKWGLVEGGHDLDVADLKVQISSAAVFLGLTRRFPSGV | 327 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo27g01236 | 327 | Pfam | ATP12 chaperone protein | 85 | 210 | IPR011419 | GO:0043461(InterPro) | |
| Chmo27g01236 | 327 | Gene3D | ATP12 ATPase | 147 | 322 | IPR023335 | - | |
| Chmo27g01236 | 327 | SUPERFAMILY | ATP12-like | 72 | 317 | - | - | |
| Chmo27g01236 | 327 | PANTHER | ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2-ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR | 23 | 320 | IPR011419 | GO:0005739(PANTHER)|GO:0033615(PANTHER)|GO:0043461(InterPro) | |
| Chmo27g01236 | 327 | Gene3D | - | 82 | 144 | IPR042272 | - | |
| Chmo27g01236 | 327 | MobiDBLite | consensus disorder prediction | 28 | 50 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo27g01236 | K07556 | ATP synthase mitochondrial F1 complex assembly factor 2 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 246114 | Chmo27g01236 | Chmo25g01418 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr25:119907520 | Chmo27g01236 | Chmo-Chr27:100826523 | wgd | |
| Chmo | Chmo-Chr26:131646730 | Chmo27g01236 | Chmo-Chr27:100826523 | wgd |