Gene detail

AGRP Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo27g01433	ATGGATCCAGACGCATTATCAAAAGCATTCGTGGAACACTACTACACAACATTCGACACAAACCGAGCAGGGCTAGCCAACCTATACCAGGAATCATCCATGTTGACTTTCGAAGGTCAAAAGATCCAAAGTGCTGTTAACATAGTTAACAAATTAACCTCGTTACCTTTCCAGCAGTGTAAACATAGTATTACAACTGTTGATTGTCAGCCTTCTGGTCCTGCTGGTGGTATGCTTGTTTTTGTTTCCGGTAATCTTCAACTTGCTGGCGAACAACACGCTCTTAAGTTTAGTCAGATGTTTCATTTGATGCCGACAGCACAAGGAAGCTTCTATGTGTTCAACGACATATTCCGCTTGAATTATGCATGA	372	41.67	MDPDALSKAFVEHYYTTFDTNRAGLANLYQESSMLTFEGQKIQSAVNIVNKLTSLPFQQCKHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTAQGSFYVFNDIFRLNYA	123

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo27g01433	123	FunFam	Nuclear transport factor 2	1	123	-	-
	Chmo27g01433	123	CDD	NTF2	2	122	IPR018222	-
	Chmo27g01433	123	Gene3D	-	1	123	-	-
	Chmo27g01433	123	PANTHER	NUCLEAR TRANSPORT FACTOR 2	2	122	IPR045875	GO:0006913(PANTHER)\|GO:0006913(InterPro)\|GO:0044613(PANTHER)
	Chmo27g01433	123	SUPERFAMILY	NTF2-like	4	121	IPR032710	-
	Chmo27g01433	123	ProSiteProfiles	Nuclear transport factor 2 domain profile.	6	120	IPR018222	-
	Chmo27g01433	123	Pfam	Nuclear transport factor 2 (NTF2) domain	7	120	IPR002075	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo27g01433	K14285	NTF2-related export protein 1/2

Event-related genes

Select	Gene_1	Gene_2	Event_name
	56874	Chmo27g01433	Chmo8g02982
	207007	Chmo25g01473	Chmo27g01433
	233401	Chmo27g01433	Chmo26g01598

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr27:111573529	Chmo4g02145	Chmo-Chr4:145887891	dispersed
	Chmo	Chmo-Chr25:122948259	Chmo27g01433	Chmo-Chr27:111573529	wgd
	Chmo	Chmo-Chr26:133769859	Chmo27g01433	Chmo-Chr27:111573529	wgd
	Chmo	Chmo-Chr26:182146022	Chmo27g01433	Chmo-Chr27:111573529	wgd
	Chmo	Chmo-Chr27:111573529	Chmo27g02691	Chmo-Chr27:173649949	wgd
	Chmo	Chmo-Chr27:111573529	Chmo7g02845	Chmo-Chr7:186818341	wgd
	Chmo	Chmo-Chr27:111573529	Chmo8g02982	Chmo-Chr8:192906992	wgd
	Chmo	Chmo-Chr27:111573529	Chmo9g03028	Chmo-Chr9:193767659	wgd