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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo27g01444 ATGGAGTCCAACACAAAGACGCGAAAAGGGTTCATGAAAGGAAAGTTGGTCATGTCTTTCATTAGAGCCGCCAAGCCTTCCACCACCATGCAACCATACAGCACCACCACTAAAACGGCTAAAACAAGTCACAACGTCTCGAGTCATATACAGCCTACAATCACAAACCAAAAGACTACTCCTACCCCTTCATCATTGATCATGAACCAAGAGAAGGTGAACACTCAACCTAAGCACATGCACATGGTCTCTTACGTTGTTCCAAAAACAACGAATACGTATGGTATGTTTGACAATCCATATGGCGCTGTGGTCGATGATGCAGTCGATGCTAAAGCTACCACTTATATCTCTTGTGTTCAAGAAAGGTTTAAACTAGAACATGTTAATAACGACTTGGTTGAGCCAGCAAGTTAA 417 42.69 MESNTKTRKGFMKGKLVMSFIRAAKPSTTMQPYSTTTKTAKTSHNVSSHIQPTITNQKTTPTPSSLIMNQEKVNTQPKHMHMVSYVVPKTTNTYGMFDNPYGAVVDDAVDAKATTYISCVQERFKLEHVNNDLVEPAS 138
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo27g01444 138 PANTHER EF-HAND DOMAIN-CONTAINING PROTEIN 1 131 - -
Chmo27g01444 138 MobiDBLite consensus disorder prediction 29 62 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo27g01444 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
207012 Chmo25g01483 Chmo27g01444
233404 Chmo27g01444 Chmo26g01611
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr25:125600930 Chmo27g01444 Chmo-Chr27:112643239 wgd
Chmo Chmo-Chr26:134940364 Chmo27g01444 Chmo-Chr27:112643239 wgd