AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00168 ATGGATGAAGGCAAGCGAATCAGCGTTGGTGTGGGTCCCACCTCTGTTTTGGAATACCTTGATCCTAACTACTGGAATGATAGGTTTACCTCTGAGGATCATTATGAGTGGCTTAAAGATTACTCCCATTTTCGTCATCTTATTCAGCAACATATCAAACCTGCTTCTTCTGTATTGGAGCTCGGGTGTGGGAACTCACAACTGTGTGATGAGCTATATAAAGAAGGAATTACTGATCTAACCTCCATTGATCTATCTTCAGTTGCAGTTGCCAAAATGCAGATACGACTGTTATCAAAAGGCCTTAAAGATATTAAAGTAATGGAAGGCGACATGCTGAATCTTTCCTTTACTGATGAGTCGTTTGATGTTGTTATAGAGAAAGGAACTATGGATGTTTTGTTCGTGGACAGTGGTGACCCTTGGAACCCGCGGCCAGAGGCTGTTAACAAGGCAATGGCAATGCTTCAAGGTGTTCATCGGGTTTTAAAACCTGACGGGATCTTCATCTCAATCGCCTTTGGTCAGCCACACTTTAGGCGTCCGTTATTTAATGCTCCTGACTTCACGTGGTCAATCGAGTATTCTACATTTGGTGATGGATTCCACTACTTCTTTTACATTTTGAGGAAGGGATGCAGATCACTAGACTCCGATGCAGATATGAATAAGGTTGAGACACCATCTATATGCCTTTATCAAGATGAACTAGATAATGAAGATTACTTATTTCGCACCAATATTGATGAAATGGACGATGAAAGATAG 768 41.41 MDEGKRISVGVGPTSVLEYLDPNYWNDRFTSEDHYEWLKDYSHFRHLIQQHIKPASSVLELGCGNSQLCDELYKEGITDLTSIDLSSVAVAKMQIRLLSKGLKDIKVMEGDMLNLSFTDESFDVVIEKGTMDVLFVDSGDPWNPRPEAVNKAMAMLQGVHRVLKPDGIFISIAFGQPHFRRPLFNAPDFTWSIEYSTFGDGFHYFFYILRKGCRSLDSDADMNKVETPSICLYQDELDNEDYLFRTNIDEMDDER 255
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00168 255 Pfam Methyltransferase domain 53 172 IPR025714 -
Chna2g00168 255 Gene3D Vaccinia Virus protein VP39 17 226 IPR029063 -
Chna2g00168 255 CDD AdoMet-MTases 58 174 - -
Chna2g00168 255 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 207 IPR029063 -
Chna2g00168 255 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 13 212 IPR051419 -
Chna2g00168 255 FunFam EEF1A lysine methyltransferase 4 17 228 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00168 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:10820021 Chna2g03562 Chna-Chr2:367595852 dispersed