AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00169 ATGGAGCTCAGGTGTATACAGTCACCAGTTGTTAGTAGCTTACCTACTAACAACAGCAAGCATCAACTAGTATGCTACGGTCAGTCTATTCGATCTTTTGGAACGAAAAAAGGTGTTCTTGAAACGAATGGGGCGAAGGTTAAATATGCTCGGTTTAGTGTTCGAGCATCAGCAGCAGTTGGTTCAGTACCTGCTGAAACAAGAACACAAGATGGCGAAAAAGACGGAGATCCAGTATTTGTTGCAGGGGCAACTGGAAAAGTTGGTTCCCGAACAGTAAGGGAGCTTTTGAAATTAGGATTTAATGTCCGAGCTGGTGTAAGGAGTACTCAAAGAGCAGAATCTCTGGTGAAAAGTGTGCAGCAGATAAAGCTTGATGACGGAAGTCAGCGTAACCCAGCTATAGAGAAGCTTCAGCTAGTGGAGTGTGACTTGGAGAAACCGGAGCAGATTAAGGCGGCATTGGGCAGTGCTTCAACAATTATTTGCTGCATTGGAGCGAGTGAGAAGGAGATATTTGATGTCACTGGACCATACCGAATTGACTTTCTAGCCACAAAAAACCTCATTGACGCAGCTGCTGCTGCAAAAGCGAAACACTTTATTCTGGTTACTTCTTTGGGAACAAACAAGTTTGGATTTCCTGCTGCTATAGTGAGACCTGGAGGTATGGAGCGTCCTACAGATTCTTTCAAGGAAACACATAATCTTACCCTCGCTACAGAAGATACTTTATTTGGTGGTCTTGTATCAAATCTACAGGTGGCAGAACTCCTTGCATTTATGGCTAAAAACCCAACTCTCGCATATTGTAAAGTACTGGAAGTAGTTGCCGAAACAACAGCACCATTGACCCCCTTTGGGGACCTTTTAACAAAAATCCCATCTAAACGTGCTGTACCTTTACAGCCCAAGTGCTATCAGGAACCTGAAGCAACCAAAGAACCTGAACCTGCACCAGCGGATGTAGGATTGAAAACAACCAGACCACTCTCTCCGTATACAGCTTATGAAAACTTGAAGCCACCAACATCTCCAATCCCGACACCAAGTGGATACCAAAAGAAACCAGAAGTTGCACCAGAAGCTGTACCAGAAGTTGCAACATCAGAAGCTGCACCAGAAGCTGCACCAGAAGCTACTACAGCCGTTGGCACTGTTACAAAGATTGAAGACGTAAGTGATGTCAAAGAGGATCCTCCTCAAGTTGTAACATCCAACAGCAGGTCCCCTTACTATGTATATGAGACTCTGAAGCCTCCTACGTCGCCAACTCCAAGTCCTCCATCTGTATCACCACCACCAATCGTCCCTGTCGACAACGGGTCCCCCATTGCTTCCACACCAGAAAGCACCTCAGCTCAATCTACAGTGAAGCCAAGACCACTTTCACCTTACTCCATGTACGAAAGTTTGAAGCCTCCAAGTTCTCCTACTCCTTCCAAACCACATTAA 1455 45.36 MELRCIQSPVVSSLPTNNSKHQLVCYGQSIRSFGTKKGVLETNGAKVKYARFSVRASAAVGSVPAETRTQDGEKDGDPVFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAESLVKSVQQIKLDDGSQRNPAIEKLQLVECDLEKPEQIKAALGSASTIICCIGASEKEIFDVTGPYRIDFLATKNLIDAAAAAKAKHFILVTSLGTNKFGFPAAIVRPGGMERPTDSFKETHNLTLATEDTLFGGLVSNLQVAELLAFMAKNPTLAYCKVLEVVAETTAPLTPFGDLLTKIPSKRAVPLQPKCYQEPEATKEPEPAPADVGLKTTRPLSPYTAYENLKPPTSPIPTPSGYQKKPEVAPEAVPEVATSEAAPEAAPEATTAVGTVTKIEDVSDVKEDPPQVVTSNSRSPYYVYETLKPPTSPTPSPPSVSPPPIVPVDNGSPIASTPESTSAQSTVKPRPLSPYSMYESLKPPSSPTPSKPH 484
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00169 484 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 218 IPR044719 -
Chna2g00169 484 MobiDBLite consensus disorder prediction 444 462 - -
Chna2g00169 484 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 293 IPR036291 -
Chna2g00169 484 Gene3D - 77 297 - -
Chna2g00169 484 MobiDBLite consensus disorder prediction 421 440 - -
Chna2g00169 484 MobiDBLite consensus disorder prediction 336 484 - -
Chna2g00169 484 Pfam NAD(P)H-binding 83 211 IPR016040 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00169 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:10825523 Chna6g04330 Chna-Chr6:353121731 dispersed