Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chna2g00188	ATGCTTGTAGAAGGAGATGGAAGTAATGTCATAAGGCTCAACACCATGGATGATCACGGTCATGATGTCCGTCAAAATGACCACATGACACAAACTGGCCATGTGCATGGTCATGGCCATCATTCGTCGTCGTCTACGAATCCAACAGATCCTCAACTCATGGTTTTCTACATGCTAAAAGATCTAGAAGTAGGCAAAGTCATGCCAATTCACTTTCCAAACAGACACCTTTCCCCGTCTCAACTCTTGTCCAAACAAGAAGCTGACAACATCCCCTTTTCGCTCACAGAATTACCAAACCTTCTTCGTATGTTCTCGTTCCGACAAGGCTCTCCACAAGCCATAGCCATGGAAAGCACACTTCAAGAATGTGAAGTCAAGCCAATCACGGGTGAAACCAAATTTTGTGCAACTTCTACGGAGTCTGTTCACGAATTTGCACGTGATATCTTTGGATTCGACACTCAGTTCAAAACTATGACCACAACTCACCTTAAAAATCCAAATAGTGGTCTTTTACAAAACTATAAAGTTATTGAGATCTCACAAAACATACCGTCTCCAAAGTTAGTGGCTTGTCACACCATGCCATACCCATATGCAGTGTTCTATTGTCATAGCCAAGAAAGCGAGAACAAAGTGCTTATGGTTACATTAGAAGGTGAAGATGGTGACATGGTCGAGGCCTTAAGTGTTTGCCACATGGACACGTCTCATTGGAGCCGTAATCATGTCTCGTTCGGCGTGCTTGGAGTTGAGCCAGGAAAGACATCGGTTTCTGATCTACTTGGAAAACACCCAGATCTTATGGAAGGTTTTAGTTCGTTTTTGGAGCTCTGTGAAAATATAGAATCTCTATGGAGTGAAGCGCATGCATCTAAATCAACTAGAGCAGAGGAGAAACAGAGGCGTGAAGCTGAAGCTTCCAAAGAGAAGACAAATACAAAGAGAAATATTGGGCTAAATCTATACAAGAGCTTGACCTCTCTGACTTTCAGCGTTGTACACCGAGCTACAGGCTTCTTCATGATGACACAAAGATCGGAGCTTGGTACTCAAGTACTGAATGATCTCTGGGTGTCCGTGACTTCCGGTAGTGAAGATTATTCTTTCAAACATATGCGTAGAAACCAGTATGAAGAGATTTTATTCAGATGTGAGGATGACAGGTTTGAGCTAGATATGTTGTTGGAGTTCGTGAATTCAACTGCTAAACGTGTTGAGGAAGTAATAAACAGCATTAACAAGACACGTCCTGAAATTCCCATTCGTACAGAAGACCAATTCAAAGTAGCTTTGCATCTGCGGTGCATGGAGCGCTTGTATGGTGATCATGGTCTTGATGTCATTGAAACACTTCGTAGAAACCCATCAGTTGCATTTCCAGTTATGCTTATTCGCCTCAAACAAAAGCAAGAAGAGTGGACAAAGTGTAAATCAGACTTCAACAAGATTAAACAGCGTTGGTGGCCAAGATTAAAAAATAAAGGAAAGTAG	1497	42.15	MLVEGDGSNVIRLNTMDDHGHDVRQNDHMTQTGHVHGHGHHSSSSTNPTDPQLMVFYMLKDLEVGKVMPIHFPNRHLSPSQLLSKQEADNIPFSLTELPNLLRMFSFRQGSPQAIAMESTLQECEVKPITGETKFCATSTESVHEFARDIFGFDTQFKTMTTTHLKNPNSGLLQNYKVIEISQNIPSPKLVACHTMPYPYAVFYCHSQESENKVLMVTLEGEDGDMVEALSVCHMDTSHWSRNHVSFGVLGVEPGKTSVSDLLGKHPDLMEGFSSFLELCENIESLWSEAHASKSTRAEEKQRREAEASKEKTNTKRNIGLNLYKSLTSLTFSVVHRATGFFMMTQRSELGTQVLNDLWVSVTSGSEDYSFKHMRRNQYEEILFRCEDDRFELDMLLEFVNSTAKRVEEVINSINKTRPEIPIRTEDQFKVALHLRCMERLYGDHGLDVIETLRRNPSVAFPVMLIRLKQKQEEWTKCKSDFNKIKQRWWPRLKNKGK	498

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chna2g00188	498	Pfam	BURP domain	55	260	IPR004873	-
	Chna2g00188	498	Coils	Coil	298	318	-	-
	Chna2g00188	498	PANTHER	SIN3B-RELATED	257	486	IPR039774	GO:0000118(PANTHER)\|GO:0000122(PANTHER)\|GO:0000785(PANTHER)\|GO:0003714(InterPro)\|GO:0003714(PANTHER)
	Chna2g00188	498	SMART	BURP-2	54	275	IPR004873	-
	Chna2g00188	498	MobiDBLite	consensus disorder prediction	294	313	-	-
	Chna2g00188	498	Pfam	Paired amphipathic helix repeat	258	277	IPR003822	GO:0006355(InterPro)
	Chna2g00188	498	SMART	hdac-interact2seq4b	334	424	IPR013194	-
	Chna2g00188	498	MobiDBLite	consensus disorder prediction	18	34	-	-
	Chna2g00188	498	ProSiteProfiles	BURP domain profile.	56	273	IPR004873	-
	Chna2g00188	498	MobiDBLite	consensus disorder prediction	18	48	-	-
	Chna2g00188	498	Pfam	Sin3 family co-repressor	345	419	IPR013194	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chna2g00188	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	58516	Chna2g00188	Chna5g01239

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chna	Chna-Chr2:11499952	Chna8g00876	Chna-Chr8:90550960	dispersed
	Chna	Chna-Chr2:11499952	Chna2g00192	Chna-Chr2:11617375	proximal
	Chna	Chna-Chr5:74984547	Chna2g00188	Chna-Chr2:11499952	transposed
	Chna	Chna-Chr5:74984991	Chna2g00188	Chna-Chr2:11499952	transposed
	Chna	Chna-Chr2:11499952	Chna5g01238	Chna-Chr5:60161097	wgd