AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00216 ATGGAAGAAAAACTAATACAAAGGTTAGAATCCGCAGTATCGCGCTTAGAATCAATGGCGTCTGGTTCTCGTTCTCAGCCGCAAAGTGTCCCATTTGACGCGGCATCAGCCTCGTCTGACCCGTCTATCATGGCATTTGATGATCTGATAAATGAATACGTTGCTAAGGTTACCGGTACGGCTGAGAAGATCGGCGGACAAGTTGTTGAGATTACGAATGTTTTAGGACAGGCTTTTAATGCTCAGAAGGAGCTGCTTATTAAGATCAAACAAACTCAGAAACCTGATGCTGGAGGGATGGCGGAATTTCTCAAGCCATTAAATGAAAATTTAATGAAAGCAAATAGCATGACAGAAGGACCGCGTTCTGATTTTTTTAACCACTTAAGATCTGTTGCTGAGAGTCTAACAGCTTTAGCATGGATTGCTTATACAGGGAAAAATTGTGGAATGAACATGCCTATTTCACATGTGGAAGAATGTTGGCAGTCAGCTGAATTTTACAGCAACAAGGTTCTAGTAGAGTACAGAAGTAAAGATCCAAATCACGCCGAATGGGCAAAAGCACTGAAGGAACTTTATGTGCCAGGGTTGAGGGATTATGTGAAGAGTTACTATGCGTTGGGACCTGTATGGAGTGCAACTGGGGCTACCGTATCTGCTCCAGCCAAATCTTCTAAATCAGGTGCTCCTTCTGCTCCAAATCCTCCACCAGCGTCGCTTTCGAGCTCAGGAGCTTCTTCTTCTTCATCATCATCTTCTTCCCGACCAAAACAAGGAATGGCTGCTGTTTTCCAGGAAATCAGTTCAAAGCCCGTTACTGCTGTTATTGATTTCATCAATGGTCAACCTGAGTACTTGACCAACACCATAATGACCCATTTTGACCCGCATACCGCCACCCAATTTGCAGCGTCTAACTTCAGTTTTATGCCTTCAGGGTTAAAAAAAGTTACGGACGACATGAAGGCCAAGAATCGCAAAGATAGAGCGGGTATTGTGAGTTCTAGTGAAAAAGAAGCACGCAAGAGTGCACCATCTGCTGCTAAAGTTGGACCACCAAAGCTTGAACTTGTAATGGGCCGCAAATGGGTTGTCGAGAATCAAATTGGCGTAAAGGATATGTGCATTGATGAGTGTGATGCAAGGCAGACAGTTTATATTTTTGGATGCAAAGATTCAGTTCTACAGATCAAAGGGAAAGTTAACAACATAACTGTTGACAAATGCACAAAAATGGGTGTTGTATTCACGGGTGCGGCTCCTACCATTTCTATAGACAACACATCAGGTTGCCAGTTATATTTGAGCAAAGATTCTCTTGAATCTTCTATAACAACTGCAAAGGCGAGTGAAGTTAATGTCATGGTACCTGCTGAAGATCCTGATGCTGATATGGCGGAACATGCTATGCCACAACAGTATATTCACACTTATAAGGATGGCAACTTCATTACGACTCCTGTCTCCCACTCTGGAGGGCGTTCTGAACTTGAAATTAATGAGGTTCCGGAGAGTAAAGCCAACTACGTTAACCGCAATTCTGTTAACACTAACCCCAACTCCGTTAATGTTATTCCCAACATTGTTAACGTTAATCGCAACAATATTAACGTTAACGATCAACAGTGGTTATACTATATGCTTGCAGCAGTAGGCGTACTTTTTGCTTTGATAGTGGCAATCACAATGAAATATTAA 1701 42.5 MEEKLIQRLESAVSRLESMASGSRSQPQSVPFDAASASSDPSIMAFDDLINEYVAKVTGTAEKIGGQVVEITNVLGQAFNAQKELLIKIKQTQKPDAGGMAEFLKPLNENLMKANSMTEGPRSDFFNHLRSVAESLTALAWIAYTGKNCGMNMPISHVEECWQSAEFYSNKVLVEYRSKDPNHAEWAKALKELYVPGLRDYVKSYYALGPVWSATGATVSAPAKSSKSGAPSAPNPPPASLSSSGASSSSSSSSSRPKQGMAAVFQEISSKPVTAVIDFINGQPEYLTNTIMTHFDPHTATQFAASNFSFMPSGLKKVTDDMKAKNRKDRAGIVSSSEKEARKSAPSAAKVGPPKLELVMGRKWVVENQIGVKDMCIDECDARQTVYIFGCKDSVLQIKGKVNNITVDKCTKMGVVFTGAAPTISIDNTSGCQLYLSKDSLESSITTAKASEVNVMVPAEDPDADMAEHAMPQQYIHTYKDGNFITTPVSHSGGRSELEINEVPESKANYVNRNSVNTNPNSVNVIPNIVNVNRNNINVNDQQWLYYMLAAVGVLFALIVAITMKY 566
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00216 566 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 2 274 IPR001837 GO:0003779(PANTHER)|GO:0003779(InterPro)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Chna2g00216 566 ProSiteProfiles C-CAP-cofactor C-like domain profile. 353 471 IPR017901 -
Chna2g00216 566 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 353 493 IPR036223 -
Chna2g00216 566 MobiDBLite consensus disorder prediction 223 261 - -
Chna2g00216 566 MobiDBLite consensus disorder prediction 321 337 - -
Chna2g00216 566 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Chna2g00216 566 FunFam Adenylyl cyclase-associated protein 42 217 - -
Chna2g00216 566 Pfam CAP N-terminal conserved motif 3 37 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
Chna2g00216 566 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 42 238 IPR036222 -
Chna2g00216 566 Gene3D - 347 417 IPR016098 -
Chna2g00216 566 SMART carp 391 418 IPR006599 -
Chna2g00216 566 SMART carp 419 447 IPR006599 -
Chna2g00216 566 MobiDBLite consensus disorder prediction 239 260 - -
Chna2g00216 566 Pfam CAP, N-terminal domain 46 209 IPR053950 -
Chna2g00216 566 MobiDBLite consensus disorder prediction 321 349 - -
Chna2g00216 566 Pfam Adenylate cyclase associated (CAP) C terminal 353 417 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Chna2g00216 566 Pfam Adenylate cyclase associated (CAP) C terminal 418 491 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Chna2g00216 566 Gene3D - 418 493 IPR016098 -
Chna2g00216 566 Gene3D - 42 217 IPR036222 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00216 K17261 adenylyl cyclase-associated protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:12899122 Chna7g02916 Chna-Chr7:256835451 wgd