Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00232 | ATGATACGAGGAGTAATAATAATAAATGATCAAGGCAAGCCACGCCTCATCAAATTCTACGACTATCAGCCTATTGAGAAACAACACGAAATCATTCGCAACATTTACACAGTTCTATGCAATAGAGCGGAGAATGTGAGCAACTTTGTTCAAGCTGATTCCACTTTTGGACCGGATACACGACTTGTATACAAGACTTTTGCTACACTGTACTTCATTGTCATATTTGATGAGTCTGAAAACGAGCTTGCCATTCTAGATCTTATGCAAGTATTCGTGGAGACGTTGGACAAGTGTTTTAGTAATGTTTGTGAGCTCGATATTGTGTTCAATTTCAGCAAGGTACATACCATCCTCAATGAGATCATCTTGGGAGGTCAAGTTGTAGAAATGAGTTCTGCCGAAGTTGTCAAGGCAGTGGACGAGATATCATGGCAAGAGAAGAACAAATTCTCTCATTCGAGCTCCAACGCCACATCTAGCTGGCAGAGACGATAA | 498 | 40.76 | MIRGVIIINDQGKPRLIKFYDYQPIEKQHEIIRNIYTVLCNRAENVSNFVQADSTFGPDTRLVYKTFATLYFIVIFDESENELAILDLMQVFVETLDKCFSNVCELDIVFNFSKVHTILNEIILGGQVVEMSSAEVVKAVDEISWQEKNKFSHSSSNATSSWQRR | 165 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00232 | 165 | ProSitePatterns | Clathrin adaptor complexes small chain signature. | 62 | 72 | IPR000804 | GO:0006886(InterPro)|GO:0016192(InterPro)|GO:0030117(InterPro) | |
| Chna2g00232 | 165 | Pfam | Clathrin adaptor complex small chain | 1 | 143 | IPR022775 | - | |
| Chna2g00232 | 165 | PANTHER | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY | 2 | 144 | IPR016635 | GO:0015031(InterPro)|GO:0016192(PANTHER)|GO:0043231(PANTHER) | |
| Chna2g00232 | 165 | SUPERFAMILY | SNARE-like | 1 | 142 | IPR011012 | - | |
| Chna2g00232 | 165 | Gene3D | - | 1 | 159 | - | - | |
| Chna2g00232 | 165 | FunFam | AP complex subunit sigma | 1 | 157 | - | - | |
| Chna2g00232 | 165 | PIRSF | AP-complex-sigma | 1 | 157 | IPR016635 | GO:0015031(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00232 | K12399 | AP-3 complex subunit sigma |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr2:14110485 | Chna2g04252 | Chna-Chr2:409053572 | dispersed |