Gene detail

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chna2g00266	ATGGCATATCAAGTGTTGGAGCGTAGCCAACCAGTTGATCTCTCAAAGCACCCATCGGGAATTGTTCCCACTCTTCAGAATATTGTGTCTACTGTCGATCTTGATTGCAAGCTAAACCTGAACGCGATTGCACAGAAAGCTCGTAATGCAGAATACAACCCCAAGCGTTTTGCTGCTGTTATCATGAGGATACGAGAACCAAAAACAACAGCTTTAATATTTTCTTCCGGGAGAATGGTATGTACAGGAGCTAAGAGTGAGCAGGAGTCAAAAATGGCAGCACGGAAGTATGCTCGGATTATTCAGAAACTCGGATTTCCAGCCAAATTTAAGTATGAACCAGAACTGTTTCCGGGACTGATATATCGAATGAAACAACCGAAAATCGTTCTGCTTATTTTTTTATCTGGAAAGATTGTTCTCACGGGAGCCAAGGTAAAAGGCGAGACTTATGCTGCATTCGAGAACATATATCCCGTCCTTACTGAATTCAGAAAGAGTAAAAATGATTCTGAGTTTGTCAGCCAGATTTATCTTACGATTCTTGATATGGATGAAATGGTGTTGTATCGGGCGAAAGTTTACTTTAGGATTGGACTTGGTTGTGAAGGGCGAAAGTGTAAATATCTTCGTGGAAATAGAATAGAGGAAGTGAAGGCTAATGCCACTACTTTCCCTTTTTTGTAA	687	40.9	MAYQVLERSQPVDLSKHPSGIVPTLQNIVSTVDLDCKLNLNAIAQKARNAEYNPKRFAAVIMRIREPKTTALIFSSGRMVCTGAKSEQESKMAARKYARIIQKLGFPAKFKYEPELFPGLIYRMKQPKIVLLIFLSGKIVLTGAKVKGETYAAFENIYPVLTEFRKSKNDSEFVSQIYLTILDMDEMVLYRAKVYFRIGLGCEGRKCKYLRGNRIEEVKANATTFPFL	228

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chna2g00266	228	FunFam	TATA-box-binding protein 2	30	112	-	-
	Chna2g00266	228	SUPERFAMILY	TATA-box binding protein-like	21	110	-	-
	Chna2g00266	228	PRINTS	Transcription initiation factor TFIID signature	49	68	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Chna2g00266	228	PRINTS	Transcription initiation factor TFIID signature	25	40	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Chna2g00266	228	PRINTS	Transcription initiation factor TFIID signature	68	86	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Chna2g00266	228	SUPERFAMILY	TATA-box binding protein-like	111	167	-	-
	Chna2g00266	228	PANTHER	TATA-BOX BINDING PROTEIN	111	168	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)\|GO:0006352(PANTHER)\|GO:0016251(PANTHER)\|GO:0140223(PANTHER)
	Chna2g00266	228	Gene3D	-	111	164	IPR012295	-
	Chna2g00266	228	CDD	TBP-eukaryotes	22	164	IPR033710	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Chna2g00266	228	Gene3D	-	30	110	IPR012295	-
	Chna2g00266	228	Pfam	Transcription factor TFIID (or TATA-binding protein, TBP)	23	104	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Chna2g00266	228	Pfam	Transcription factor TFIID (or TATA-binding protein, TBP)	110	164	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Chna2g00266	228	ProSitePatterns	Transcription factor TFIID repeat signature.	112	161	IPR030491	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chna2g00266	K03120	transcription initiation factor TFIID TATA-box-binding protein

Event-related genes

Select	Gene_1	Gene_2	Event_name
	58527	Chna2g00266	Chna5g01196
	58528	Chna2g00266	Chna7g02940

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chna	Chna-Chr2:15650575	Chna2g04557	Chna-Chr2:422152924	dispersed
	Chna	Chna-Chr2:15650575	Chna5g01196	Chna-Chr5:57379872	wgd
	Chna	Chna-Chr2:15650575	Chna7g02940	Chna-Chr7:259860131	wgd