Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chna2g00290	ATGGATCGTAGGGTTTTTCTTGTTTTCTTTGTTGTTTCTCTTTTGGCAGTTTTCGTCTCCGGAGATGGTGATTTCACCAGTTCCGGAGACGACATGATCATTCGTCAGGTTGTCAATACAACCGAAAAATATGGATCCCACTTTGGTGCCTTCATGCGCAAGTTTGGCAAATTTTACGCGTCACAAAAGGAGCATGATTATAGGTTTTCGGTTTTCAAGGCTAACATGTTACGTGCTAAGCGTCACCAGAAGCTTGATCCATCTGCTGTTCATGGTGTGACTAGGTTTTCTGACATGACGTCGTTGGAGTTTAGGAGGCATCTTGGACTTAGGTCTCGGCTTAGGTTTCCGTCTGATGCTGGTAAGGCTGAGATTCTTCCAACGGATGATTTGCCGAGGGATTTTGATTGGAGAGAGCGTGGTGCTGTTACTGAGGTCAAGGATCAGGGTACTTGTGGGTCATGCTGGTCGTTTAGTACAACTGGTGCGTTGGAAGGTGCAAACTTCCTTGCAACAGGGAAGCTTGAAAGCCTTAGTGAGCAGCAACTTGTTGATTGTGATCATGAGTGTGATCCAGAATCACAAGGATCATGTGATGCAGGGTGTAATGGGGGTCTTATGAATAGTGCTTTTGAGTACACTCTTAAAGCCGGTGGGCTTATGAGGGAAAAAGACTATCCTTACACCGGCAACGACACTGGAAGCTGCAAATTTGATAAAAACAAGGTTGTTGCATCTGTTAGTAACTTCAGTGTCGTATCCCTTGACGAAGACCAAATTGCTGCCAATCTTGTGAAGAATGGTCCTCTCGCGGTGGCTCTCAATGCAGTTTACATGCAGACATATGTTGGGGGAGTGTCGTGCCCATACATGTGCTCAAAGAGGCTAAACCATGGTGTGTTGTTGGTCGGATATGGTGCAGCTGGATATTCTGAAACAAGAAAGACAAAGAAGCCATATTGGATTATCAAGAACTCTTGGGGACCAGAATGGGGAGAGAATGGATATTACAAGATCTGCAAGGGTCATAACGTTTGTGGTGTTGATTCCATGGTCTCTGCTGTCGTAGCAGTTGACCGACACTAG	1086	45.49	MDRRVFLVFFVVSLLAVFVSGDGDFTSSGDDMIIRQVVNTTEKYGSHFGAFMRKFGKFYASQKEHDYRFSVFKANMLRAKRHQKLDPSAVHGVTRFSDMTSLEFRRHLGLRSRLRFPSDAGKAEILPTDDLPRDFDWRERGAVTEVKDQGTCGSCWSFSTTGALEGANFLATGKLESLSEQQLVDCDHECDPESQGSCDAGCNGGLMNSAFEYTLKAGGLMREKDYPYTGNDTGSCKFDKNKVVASVSNFSVVSLDEDQIAANLVKNGPLAVALNAVYMQTYVGGVSCPYMCSKRLNHGVLLVGYGAAGYSETRKTKKPYWIIKNSWGPEWGENGYYKICKGHNVCGVDSMVSAVVAVDRH	361

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chna2g00290	361	ProSitePatterns	Eukaryotic thiol (cysteine) proteases cysteine active site.	149	160	IPR000169	-
	Chna2g00290	361	Pfam	Papain family cysteine protease	131	355	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Chna2g00290	361	SMART	pept-c1	131	356	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Chna2g00290	361	FunFam	Cysteine protease RD19A	32	356	-	-
	Chna2g00290	361	SUPERFAMILY	Cysteine proteinases	44	355	IPR038765	-
	Chna2g00290	361	SMART	Inhibitor-I29-2	48	104	IPR013201	-
	Chna2g00290	361	Pfam	Cathepsin propeptide inhibitor domain (I29)	48	104	IPR013201	-
	Chna2g00290	361	PRINTS	Papain cysteine protease (C1) family signature	298	308	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Chna2g00290	361	PRINTS	Papain cysteine protease (C1) family signature	320	326	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Chna2g00290	361	PRINTS	Papain cysteine protease (C1) family signature	149	164	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Chna2g00290	361	Gene3D	Cysteine proteinases	24	357	-	-
	Chna2g00290	361	ProSitePatterns	Eukaryotic thiol (cysteine) proteases histidine active site.	296	306	IPR025660	-
	Chna2g00290	361	CDD	Peptidase-C1A	132	355	IPR039417	-
	Chna2g00290	361	PANTHER	CYSTEINE PROTEASE FAMILY C1-RELATED	47	348	IPR013128	GO:0004197(PANTHER)\|GO:0005615(PANTHER)\|GO:0005764(PANTHER)\|GO:0008234(InterPro)\|GO:0051603(PANTHER)
	Chna2g00290	361	ProSitePatterns	Eukaryotic thiol (cysteine) proteases asparagine active site.	320	339	IPR025661	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chna2g00290	K01373	cathepsin F [EC:3.4.22.41]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chna	Chna-Chr2:16704142	Chna6g03292	Chna-Chr6:289802075	dispersed
	Chna	Chna-Chr5:5017038	Chna2g00290	Chna-Chr2:16704142	transposed
	Chna	Chna-Chr2:16704142	Chna7g02959	Chna-Chr7:260770927	wgd