AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00415 ATGACGGGAAAGAAGCGATTTGCTTCGAAATCAGTGATATTGTTATTGGTATTAATATGTATCGTTGTTTTAGTCGGGTTATTATCTGAATTTAAGCTTCAGTCATCTACTGAATTTAGCTACAATCATGACTTAATCGAGTATCCGTTGATAAAGAATAATAATAAGATTGCTTTTCTATTTCTTGTTAGAGATAACCTTCCTCTTGATTTCCTTTGGCATAATTTCTTTAAGAATGCAGATCCTGAGAATTTCACAATTTACGTACACTCGAAGCCTGGTATTTTGTTCGACAAGTCCGTTACCAAATCAGCTTTCTTCTACAATCGGCAGCTGAGAAGCAGCGTTGAGGTTGGTTGGGGTACACCAACTATGATTGAAGCAGAGAAGCTGTTGTTCAAGGCGGCCCTTGATGATCCAACAAATCAGATATTCATTCTCCTCTCTGACAGTTGTGTCCCACTGTATAATTTCAGTTATATATACAAATATCTCATGTCATCTCAGAGAAGTTTTGTGGACAGCTTTATAGATGTCACGGATGATCCCAGGGAAAAACGCTATAACCCAGAGATGTCCCCTGACATACCCGAAGACAAATGGCGGAAAGGATCCCAGTGGATCACATTGGTCAGAAGGCATGCAGAGGTGGTTGCATATGATCACGCTGTTTTCCCAATCTTTGAAAAACACTGCAAGCGGCGACCTCTTCTAGACTTGAGCAAGGGAAACGAGTCTCTTATAGAACAACAGCAGCACAATTGCATCCCAGATGAACATTATGTGTCAACGTTACTTGCAATGCGTGGATTTGAAGCTGAATTGGAGCGAAGAACATTAACTTATTCTTTATGGAACCAGTCTACTGAACCGATGAATACACAAGCCTGGCATCCTGTAACATTTGGTTATTCAAGTGCCAGCCAGAAAAATATTCAAGATATTAAGGATATTGATCATGTTTATTTTAAGTCTGAAAATCGGACTGAATGGTGTGGTACTAAATCTGGTAGCGGTCATTGTTATTTATTTGCTAGGAAATTCTCGCGTGGTGCAGCCATGCGACTTTTGACCAATGGGGTAGTTGGTCCCTATGATCCCAACACATTGTTCTTAGACCCAACATAG 1128 40.07 MTGKKRFASKSVILLLVLICIVVLVGLLSEFKLQSSTEFSYNHDLIEYPLIKNNNKIAFLFLVRDNLPLDFLWHNFFKNADPENFTIYVHSKPGILFDKSVTKSAFFYNRQLRSSVEVGWGTPTMIEAEKLLFKAALDDPTNQIFILLSDSCVPLYNFSYIYKYLMSSQRSFVDSFIDVTDDPREKRYNPEMSPDIPEDKWRKGSQWITLVRRHAEVVAYDHAVFPIFEKHCKRRPLLDLSKGNESLIEQQQHNCIPDEHYVSTLLAMRGFEAELERRTLTYSLWNQSTEPMNTQAWHPVTFGYSSASQKNIQDIKDIDHVYFKSENRTEWCGTKSGSGHCYLFARKFSRGAAMRLLTNGVVGPYDPNTLFLDPT 375
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00415 375 PANTHER CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 17 357 IPR044174 GO:0016757(InterPro)
Chna2g00415 375 Pfam Core-2-I-Branching enzyme 57 315 IPR003406 GO:0016020(InterPro)|GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00415 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:26034204 Chna2g04688 Chna-Chr2:426903108 dispersed
Chna Chna-Chr2:26034204 Chna5g01745 Chna-Chr5:81480411 transposed