Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chna2g00430	ATGCCACCATTAAAAACCATCATATTCATTTTAACAATCCCATATCCAACAACTGGTGATCAATCCTATATCTCAATCTTAATAACCCAAAAGGGTCTTAATTTCACCAAAGATTTACTCATATCAAAAGCCTTATCATCACTTACTCGAACACCAATATCTGAAATTGTGAAAAATGTTAAGATACCTTTGATTGGTAAAGTGCATGTTGTTCTTAAAGATATTGGTATTAATGGGGTTCAAGTTGGGTCATCTGATGTTGTGCCTAGTGTTGGTGGTGTTGTGATTGTTGGTAATGGTGTTAGTTGTGAGTTGGAGGTCAAGTGGCATTATAGTTATGGGACTTGGGTTGGCCCCGTTTCGGTTTCGGATAGTGGGACTGCTTCTATTAAGGTTGATGGCATGGAAATCAGAGTAACACTAGACGTGGTGAATAAAGAAGGATCTATGAAACTTTCCATCGTGGAATGTAATTGTCATATAAATGATATCTCCATAGATTTAGATGGAGGAGCATCTTGGCTCTATCAAGGGATTGTGGATGCTTTTGAAGATGAAATACTCTCAGCAGTAGAAAAAGCAATTACCAAGACACTGAAAGCCGGAATTTCACACCTTGAATCAATGTTACAAACTCTTCCGAAACAAATCCCAGTGGATGATACTGCTTCATTAAATGTTACATTTGTTAACAACCCTTATACGAGCGACACTTCACTAGGCGTTGAGATAAATGGGTTGTTTATACAAAATAAAACCCACGCACATTCATACCACAACGGTTTGCAGCCACCAGTTTCTTGTTCAGAATCTTCAAAGATGATTGGAATTGCCTTAGATGAAGCTGTTTTTAAATCTGCATCTGCCTTATACTATAATGCTAAGTTTATGCACTGGATTGTGGATAAAATTCCACAACAATCTCTAATGAACACAGCGGGATGGAGATTTATTGTGCCTCAACTTTACAGGAAATACCCAAATGCTGATATGAATTTGGACATTACACTGTCTGATCCTCCAGTTATGCAGATATCATGGCAGAAAATTGGTGCAATCGTCTATGCAGACTTAATTATAGATGTTCTTGAAGGCGATGACACAATACCTGTTGCTTGTATCTCACTGGTAATTGCTGGCACGGGTTCAATTGAAGTTGTAGGAAACAACCTTACAGGTCATATGAATTTGGATGATTTCACCATGTCGTTGAAATGGAGCAAGATTGGCACCTTGCACATGTTTCTTATTCAGCCAGTGATGTGGACGATCATTGAAACGGTTTTCTTGCCATATGCGAATGCACGATTTGGGGTTGGCTTCCCGTTGCCTATAATACGTGGTTTTATGCTACAAAATGCTGAGATAATACCCTCAGATTCAAGAATCACGGTCTGCAGTGACGTTGCTTATGAGGAATATGTTGATATTAGCCGATCCCTCGTTTACACTTCATGA	1458	38.75	MPPLKTIIFILTIPYPTTGDQSYISILITQKGLNFTKDLLISKALSSLTRTPISEIVKNVKIPLIGKVHVVLKDIGINGVQVGSSDVVPSVGGVVIVGNGVSCELEVKWHYSYGTWVGPVSVSDSGTASIKVDGMEIRVTLDVVNKEGSMKLSIVECNCHINDISIDLDGGASWLYQGIVDAFEDEILSAVEKAITKTLKAGISHLESMLQTLPKQIPVDDTASLNVTFVNNPYTSDTSLGVEINGLFIQNKTHAHSYHNGLQPPVSCSESSKMIGIALDEAVFKSASALYYNAKFMHWIVDKIPQQSLMNTAGWRFIVPQLYRKYPNADMNLDITLSDPPVMQISWQKIGAIVYADLIIDVLEGDDTIPVACISLVIAGTGSIEVVGNNLTGHMNLDDFTMSLKWSKIGTLHMFLIQPVMWTIIETVFLPYANARFGVGFPLPIIRGFMLQNAEIIPSDSRITVCSDVAYEEYVDISRSLVYTS	485

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chna2g00430	485	Gene3D	-	31	211	-	-
	Chna2g00430	485	SMART	bpi1-3	28	253	IPR017942	GO:0008289(InterPro)
	Chna2g00430	485	Pfam	LBP - BPI - CETP family, C-terminal domain	256	471	IPR001124	GO:0008289(InterPro)
	Chna2g00430	485	Pfam	LBP - BPI - CETP family, N-terminal domain	32	206	IPR017942	GO:0008289(InterPro)
	Chna2g00430	485	PANTHER	OS06G0309200 PROTEIN	10	481	IPR045897	-
	Chna2g00430	485	Gene3D	-	26	457	-	-
	Chna2g00430	485	PIRSF	Lipid-binding-protein	4	475	IPR030675	GO:0005615(InterPro)\|GO:0008289(InterPro)
	Chna2g00430	485	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	240	471	IPR017943	GO:0008289(InterPro)
	Chna2g00430	485	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	25	236	IPR017943	GO:0008289(InterPro)
	Chna2g00430	485	CDD	BPI2	274	469	-	-
	Chna2g00430	485	SMART	bpi2-2	269	467	IPR001124	GO:0008289(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chna2g00430	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chna	Chna-Chr2:27506741	Chna6g03930	Chna-Chr6:333297306	dispersed