AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00468 | ATGGGTAAAATCTTAGCTATTCTTTTTTGCATCTTGTTAACAAATCTATCAGTTTCGTACGGTCAAACCTGTAGAAATTATGCTTTTCCTAGTAACGCGGTATACGCGACATGTGTCTCGTTACCAGTTTTAAACTCACATCTTCATTGGAACTACCATGCTAATGGTACAGTTGACGTGGCATTTCGTCACACTGGGTCCAACACAAACCAATGGGTTGCATGGGCCTTAAATATTCGTGGGTCAGGTATGATTGGTGCACAAGCCCTTGTAGCATTAACAAGCTCAAACGGGTCGGTTCAAGCTTATACTAGTGATGTAAATAGTTTTAATACGGGTTTACAGTCGAGTTCTTTAAGCTTTGAGGTGCCAGTGATTAGAGCTGAGAGAATTAATGGAGATGTGGTTATTTATGCAACGTTGGTTTTGCCACGTGGAGGGACGAGATTTAATCAAGTGTGGCAAGTGGGTCCGGTTAATAATGGAGCTCCGCGTATACATGAGTTGGGTAATGATAATAGGAACTCGGTTGGGTCGGTTGACTTTAGTACTGGTCAAACTGGTGGTGGTGGTAGTGTTGGTGGATCACGGATGCGAAGGAGGAATACTCATGGAGTATTAAACGCTGTTAGTTGGGGAGTATTGATGCCTTTGGGAGCTATGACAGCAAGATATTTAAAGGTGTTTAAAGTAGCTAATCCAGCCTGGTTCTATATCCATGCTGCTTGCCAAACATCAGCCTATGGCGTAGGTGTAGCGGGATGGGCCACTGGACTCAAGCTAGGCAGTGACTCAGCCGGAATCACTCACACGAGTCATCGCAACATTGGAATCATCCTCTTTTCACTTGGAACACTTCAGGTTTTCGCTTTGCTGTTGAGGCCTAAGCCAGACAACAAGTACAGATTTTATTGGAACATATACCACCATGGCCTTGGATACTCGGTGATCATCTTGAGCATTATCAACGTCTACGAGGGACTTGATATCTTGGACCCTGAGAAGAAGTGGAAGCACGCCTACACCGGCATACTTATATCTTTGGGGGCGATCACGGTTCTGTTAGAAGCTTTGACATGGTTCATCGTTTTGAAGAGGAAGAAGGAAGACAAAAGGACACATGCAGGGACTAATGGTTCATATGGAGCCAATGGATCTGCGTAG | 1164 | 44.42 | MGKILAILFCILLTNLSVSYGQTCRNYAFPSNAVYATCVSLPVLNSHLHWNYHANGTVDVAFRHTGSNTNQWVAWALNIRGSGMIGAQALVALTSSNGSVQAYTSDVNSFNTGLQSSSLSFEVPVIRAERINGDVVIYATLVLPRGGTRFNQVWQVGPVNNGAPRIHELGNDNRNSVGSVDFSTGQTGGGGSVGGSRMRRRNTHGVLNAVSWGVLMPLGAMTARYLKVFKVANPAWFYIHAACQTSAYGVGVAGWATGLKLGSDSAGITHTSHRNIGIILFSLGTLQVFALLLRPKPDNKYRFYWNIYHHGLGYSVIILSIINVYEGLDILDPEKKWKHAYTGILISLGAITVLLEALTWFIVLKRKKEDKRTHAGTNGSYGANGSA | 387 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00468 | 387 | Gene3D | - | 182 | 374 | - | - | |
| Chna2g00468 | 387 | CDD | Cyt-b561-FRRS1-like | 179 | 357 | - | - | |
| Chna2g00468 | 387 | ProSiteProfiles | Cytochrome b561 domain profile. | 163 | 364 | IPR006593 | - | |
| Chna2g00468 | 387 | Pfam | Protein of unknown function (DUF568) | 84 | 182 | IPR045265 | - | |
| Chna2g00468 | 387 | SMART | 561-7 | 203 | 328 | IPR006593 | - | |
| Chna2g00468 | 387 | CDD | DOMON-CIL1-like | 35 | 182 | IPR045265 | - | |
| Chna2g00468 | 387 | MobiDBLite | consensus disorder prediction | 177 | 191 | - | - | |
| Chna2g00468 | 387 | MobiDBLite | consensus disorder prediction | 177 | 198 | - | - | |
| Chna2g00468 | 387 | PIRSF | UCP037471 | 1 | 386 | IPR017214 | - | |
| Chna2g00468 | 387 | ProSiteProfiles | DOMON domain profile. | 44 | 157 | IPR005018 | - | |
| Chna2g00468 | 387 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 182 | 372 | - | - | |
| Chna2g00468 | 387 | Pfam | Eukaryotic cytochrome b561 | 204 | 328 | IPR006593 | - | |
| Chna2g00468 | 387 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 7 | 368 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00468 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 58549 | Chna2g00468 | Chna5g01043 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr2:32469569 | Chna2g02141 | Chna-Chr2:225450598 | dispersed | |
| Chna | Chna-Chr2:115112728 | Chna2g00468 | Chna-Chr2:32469569 | transposed | |
| Chna | Chna-Chr2:349008987 | Chna2g00468 | Chna-Chr2:32469569 | transposed | |
| Chna | Chna-Chr4:65336718 | Chna2g00468 | Chna-Chr2:32469569 | transposed | |
| Chna | Chna-Chr6:244427579 | Chna2g00468 | Chna-Chr2:32469569 | transposed | |
| Chna | Chna-Chr7:130100274 | Chna2g00468 | Chna-Chr2:32469569 | transposed | |
| Chna | Chna-Chr9:62464917 | Chna2g00468 | Chna-Chr2:32469569 | transposed | |
| Chna | Chna-Chr9:158522064 | Chna2g00468 | Chna-Chr2:32469569 | transposed | |
| Chna | Chna-Chr2:32469569 | Chna5g01043 | Chna-Chr5:50993641 | wgd |