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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chna2g00486	ATGGTGGGTCTGTCTATTGGAGAAAAGCACTTTATACAAGGTGGAATTGCTCAAGACCTTCGTACTGATGGTCGTAAAAGATTAACTTACCGCCCTATAGTTGTGGAAACTGGTGTCATTGCCCAAGCAAATGGTTCAGCAAGAGTGAAGATGGGCAGAACTGAAGTCATTGCAAGTGTTAAGGCTGAACTAGGAAGACCAACTTCATCAGCGCCAGACAAAGGAAAAGTTTCCATATATATTGATTGTAGTCCCACAGCGGCACCAGAATTCGAGAGGAGAGGTGGTGAAGAATTATCGATGGAACTGTCAGCAGCATTACGACAATGTCTTTTGGGAGGTAAAACCGGTGCAGGAGCTGGAATTAATCTTTCATCTTTGTCGATAGTGGATGGGAAGGTCTGTTGGGATCTGTATATTGATGGTCTTGTGATTAGTATGGATGGAAATGTACTTGATGCTTTGGGTGCTGCCATCAAGGCTGCTTTAAGCAATACAGGCATTCCGAAAGTCAATGTTGCATCAGCCACTCCTACTGATGAACAGCCAGAGGTTGATGTGAGTGATGAAGAATTTCTACAGTTCGACACCACTGCGGTCCCGGTCATTGTTACTTTAACTAAGGTTGGACGGCATTACATTGTAGATGCAACTTCAGAGGAGGAATCACAAATGAGCTCTGCTGTATCTGTTTCAATAAACAGGCAAGGATTGATTTGTGGGTTGACAAAAAGAGGAGGTGCAGGTTTAGATCCAAGTGTCATTCTTGACATGATTTCAGTGGCTAAACATGTAAGTGAGCAGTTAATGAACAAACTGGATTCAGAGATAGCTGCAGCCGAGGCTATGGAAGAGGAATCATGA	864	43.52	MVGLSIGEKHFIQGGIAQDLRTDGRKRLTYRPIVVETGVIAQANGSARVKMGRTEVIASVKAELGRPTSSAPDKGKVSIYIDCSPTAAPEFERRGGEELSMELSAALRQCLLGGKTGAGAGINLSSLSIVDGKVCWDLYIDGLVISMDGNVLDALGAAIKAALSNTGIPKVNVASATPTDEQPEVDVSDEEFLQFDTTAVPVIVTLTKVGRHYIVDATSEEESQMSSAVSVSINRQGLICGLTKRGGAGLDPSVILDMISVAKHVSEQLMNKLDSEIAAAEAMEEES	287

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chna2g00486	287	PANTHER	EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN	1	281	IPR050590	GO:0000176(PANTHER)\|GO:0000177(PANTHER)\|GO:0000467(PANTHER)\|GO:0016075(PANTHER)\|GO:0017091(PANTHER)\|GO:0034427(PANTHER)\|GO:0034473(PANTHER)\|GO:0034475(PANTHER)\|GO:0034476(PANTHER)\|GO:0043928(PANTHER)\|GO:0071028(PANTHER)\|GO:0071035(PANTHER)\|GO:0071038(PANTHER)\|GO:0071042(PANTHER)
	Chna2g00486	287	SUPERFAMILY	Ribosomal protein S5 domain 2-like	4	223	IPR020568	-
	Chna2g00486	287	Pfam	3' exoribonuclease family, domain 2	200	263	IPR015847	-
	Chna2g00486	287	CDD	RNase-PH-RRP42	4	275	-	-
	Chna2g00486	287	Gene3D	-	3	287	IPR027408	-
	Chna2g00486	287	SUPERFAMILY	Ribonuclease PH domain 2-like	196	283	IPR036345	-
	Chna2g00486	287	FunFam	Exosome complex component RRP42	3	286	-	-
	Chna2g00486	287	Coils	Coil	266	286	-	-
	Chna2g00486	287	Pfam	3' exoribonuclease family, domain 1	30	169	IPR001247	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chna2g00486	K12589	exosome complex component RRP42

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chna	Chna-Chr2:33357818	Chna4g02360	Chna-Chr4:166371258	dispersed