AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00489 | ATGGCTACACAATTGAATCCATCATCTTCCACCACCACCACCTTAATCTCACCACCTTCTTCATTCAATCAACAATCTGTTAAAAACATTTCAACAAAATCAAGATTGGTTTTCAAGATTCAGTCAAATTTCAACCAAAAAAAACAATTTGAACTTAAGTCCTCAAATGGGTATCCTCTTAATGCTGTTTCTTTGCATGATGGTGCAGCAGAAAAGCCTCTAGCAAAAGAAACTGTTGTATTACCGGAACAAGCCGAGACCAATCTTAGTGTGACGGTTGTGGGTGCTTCAGGCGATCTTGCTAAGAAAAAGATATTCCCTGCCCTTTTTGCTCTCTTTTATGAGGGCTGTTTACCACAGAATTTTACTATATTTGGTTATGCTCGAACCAAAATGACCGATGAGGAGCTGAGGGAAATGATTAGTAGAACATTAACTTGCAGAATTGATAAGAGGGAAAACTGTGGTGACAAAATGGAAGAGTTTCTTAATAGATGCTTTTACCATTCGGGTCAATACGGGTCTGAGGAAAATTTTGCAGAATTAGACACTAAGCTAAAACAGAAAGAGGGCGGAAAACTGTCGAATAGGTTGTTTTACTTGTCAATACCTCCAGACATTTTTGTGGATGTAGTACGTTGTGCAAGTGAAAGAGCTTCTTCTAAAACTGGGTGGACACGGGTGATAGTCGAGAAACCATTTGGGCGTGACTCGGAATCGATTGATCATTATTTGGGTAAGGAGCTCGTGGAGAATTTATCAGTTCTTCGTTTCTCAAATCTTGTTTTTGAACCACTTTGGTCAAGAAACTACATTCGCAGTGTACAATTCATATTTTCTGAAGACTTTGGTACAGAAGGACGAGGAGGTTACTTTAACAACTATGGAATCATTCGCGATATAATGCAAAACCACCTTCTGCAAATATTAGCATTGTTTGCAATGGAAACACCCGTCAAAGTTTTGAGGTCAATGAGACAACTTAAACTCGAAGATGTAGTTGTCGGTCAATATAAGGGGCATAGCAAGGGGGGAAAGACGTTTTTTGGATACACAGAGGACCCGACTGTCCCAAACGATAGCATCACTCCAACTTTTGCAGCAGCAGCACTTTTTATTGATAATGCTCGGTGGGATGGTGTTCCTTTCCTCATGAAAGCTGGAAAGGCCCTGAATACTAGACGGGCGGAGATCAGAGTTCAATTCAGACATGTTCCAGGTAACCTGTATAAACGAAACTTTGGGACAGATATGGACAAAGCTACAAACGAACTTGTGCTTCGTGTGCAGCCCAATGAAGCCATATTTCTTAAAATCAATAACAAGATCCCTGGTCTTGGTATGAGGCTCGACAGAAGTGACCTTAATTTGCTCTATAGTACGAGGTATCCAAAGGAAATACCGGATGCATACGAGAGGCTTTTATTGGACGCGATAGAAGGAGAAAGGAGATTGTTTATAAGAAGTGATGAGCTTGATGCTGCATGGTCTATATTTACCCCATTGTTGAAAGAACTTGAGTCTAACAAGATTGCACCGGAGTTATATCCGTATGGTAGTAGAGGACCGGTTGGAGCTCATTATCTGGCTGCAAAATACAATGTCCGGTGGGGTGATCTTGCGGGCGATGACTAA | 1635 | 40.98 | MATQLNPSSSTTTTLISPPSSFNQQSVKNISTKSRLVFKIQSNFNQKKQFELKSSNGYPLNAVSLHDGAAEKPLAKETVVLPEQAETNLSVTVVGASGDLAKKKIFPALFALFYEGCLPQNFTIFGYARTKMTDEELREMISRTLTCRIDKRENCGDKMEEFLNRCFYHSGQYGSEENFAELDTKLKQKEGGKLSNRLFYLSIPPDIFVDVVRCASERASSKTGWTRVIVEKPFGRDSESIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRSVQFIFSEDFGTEGRGGYFNNYGIIRDIMQNHLLQILALFAMETPVKVLRSMRQLKLEDVVVGQYKGHSKGGKTFFGYTEDPTVPNDSITPTFAAAALFIDNARWDGVPFLMKAGKALNTRRAEIRVQFRHVPGNLYKRNFGTDMDKATNELVLRVQPNEAIFLKINNKIPGLGMRLDRSDLNLLYSTRYPKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSIFTPLLKELESNKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLAGDD | 544 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00489 | 544 | NCBIfam | glucose-6-phosphate dehydrogenase | 90 | 538 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | Pfam | Glucose-6-phosphate dehydrogenase, C-terminal domain | 255 | 537 | IPR022675 | GO:0004345(InterPro)|GO:0006006(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | SUPERFAMILY | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 242 | 537 | - | - | |
| Chna2g00489 | 544 | ProSitePatterns | Glucose-6-phosphate dehydrogenase active site. | 242 | 248 | IPR019796 | GO:0004345(InterPro)|GO:0006006(InterPro) | |
| Chna2g00489 | 544 | Hamap | Glucose-6-phosphate 1-dehydrogenase [zwf]. | 88 | 539 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | FunFam | Glucose-6-phosphate 1-dehydrogenase | 85 | 256 | - | - | |
| Chna2g00489 | 544 | Pfam | Glucose-6-phosphate dehydrogenase, NAD binding domain | 93 | 240 | IPR022674 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 84 | 255 | IPR036291 | - | |
| Chna2g00489 | 544 | PANTHER | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD | 85 | 536 | IPR001282 | GO:0004345(PANTHER)|GO:0006006(PANTHER)|GO:0006006(InterPro)|GO:0009051(PANTHER)|GO:0009570(PANTHER)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | PRINTS | Glucose-6-phosphate dehydrogenase signature | 302 | 318 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | PRINTS | Glucose-6-phosphate dehydrogenase signature | 232 | 260 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | PRINTS | Glucose-6-phosphate dehydrogenase signature | 377 | 403 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | PRINTS | Glucose-6-phosphate dehydrogenase signature | 284 | 301 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | Gene3D | - | 87 | 245 | - | - | |
| Chna2g00489 | 544 | FunFam | Glucose-6-phosphate 1-dehydrogenase | 241 | 538 | - | - | |
| Chna2g00489 | 544 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Chna2g00489 | 544 | Gene3D | Dihydrodipicolinate Reductase; domain 2 | 246 | 538 | - | - | |
| Chna2g00489 | 544 | PIRSF | G6PD | 76 | 241 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Chna2g00489 | 544 | PIRSF | G6PD | 240 | 541 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00489 | K00036 | glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr1:247879486 | Chna2g00489 | Chna-Chr2:34262416 | dispersed | |
| Chna | Chna-Chr2:34262416 | Chna8g00984 | Chna-Chr8:96819439 | dispersed | |
| Chna | Chna-Chr2:34262416 | Chna4g02639 | Chna-Chr4:200821055 | transposed |