AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00524 ATGCACAAGACAGCACAATCATGGTTCACAGGAGGCCCAAGCCAATCAAACAGCGATCTTAATAAGAAACCACCTTCACTTCTTGCTGACTGGAACGCTTACGCTGCATCATCTTCAGATGCTGATAGTCAAGATCTTGATTTAGGGTTTGATATTGAATCTGCTGTTAGGACTAAGGTTTCCGGTACTTTTAATGTAGTTTCAAAGGGAGTGAGGGACATACCTGGTAGTTTGCAGTCAGCAACAAGCAATGTCTCAACTGGAAAGTCTTTCATGACGTTTGGTATACTTCTTGCTGTTGGGGTGTTCCTAGTCTTTATTGCGGTCACTGTATTTCTACCAGTCATGGTGTTTGCGCCTCAGAAGTTTGCTATATGTTTCACAATTGGTTGTGCCCTCATAATTGCTTCATTTTTTGCTCTAAAAGGTTATAGAACTCAGTTTGCACACATGACATCTAGAGAGAGACTTCCTATTACATTGGGCTTTATTGGCAGCATGCTCGGTACCTTTTGTGAACTTGATAATGAAGATGTTAACCTTGAGGCAGCTTTTTGTTGCCGGAGATTGTTTAATAGATGTCGGCTGGTTATGACTATTTCTATACAACAATATAAGTAA 621 40.58 MHKTAQSWFTGGPSQSNSDLNKKPPSLLADWNAYAASSSDADSQDLDLGFDIESAVRTKVSGTFNVVSKGVRDIPGSLQSATSNVSTGKSFMTFGILLAVGVFLVFIAVTVFLPVMVFAPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSRERLPITLGFIGSMLGTFCELDNEDVNLEAAFCCRRLFNRCRLVMTISIQQYK 206
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00524 206 PANTHER UNCHARACTERIZED 1 172 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Chna2g00524 206 MobiDBLite consensus disorder prediction 1 21 - -
Chna2g00524 206 Pfam Got1-Sft2-like family 92 172 IPR007305 GO:0016192(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00524 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:36604243 Chna7g03885 Chna-Chr7:324770541 dispersed