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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00535 ATGGCAAAGCAAAAGATTGTTGTTAGAGTGACGATGGAGAACGGCAAGAAATCTCGTAAGGCTTTGAGGATCGCCGTTAGTCTCGATGGAGTTGACTCAGCGTCTTTCGTTGGATCAGACCAGATAGCAGTGACAGGGGAAGGTATCGACTCGGTCAAACTAGCAACTTTGCTAAGGAAAGGCGTAGGATTTACGGAGCTAGTGACAGTTGGTAACGTGGAGGAGAAGAAACCCGAGGTTAAGGAAACAAAGCCAGCAGACGTGACTTGGCAAATTGATCCTTACGAGTACAATTACTACAATGGCTACGGCATCCCGTACTATTACGTATATGATTTGTGA 342 45.91 MAKQKIVVRVTMENGKKSRKALRIAVSLDGVDSASFVGSDQIAVTGEGIDSVKLATLLRKGVGFTELVTVGNVEEKKPEVKETKPADVTWQIDPYEYNYYNGYGIPYYYVYDL 113
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00535 113 PANTHER OS04G0464100 PROTEIN 4 87 IPR044296 -
Chna2g00535 113 Gene3D - 1 76 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00535 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:37173534 Chna2g00535 Chna-Chr2:37259028 dispersed
Chna Chna-Chr2:37179603 Chna2g00535 Chna-Chr2:37259028 dispersed
Chna Chna-Chr2:37218400 Chna2g00535 Chna-Chr2:37259028 dispersed
Chna Chna-Chr2:37259028 Chna2g00542 Chna-Chr2:37826067 dispersed
Chna Chna-Chr2:37242355 Chna2g00535 Chna-Chr2:37259028 tandem
Chna Chna-Chr2:37259028 Chna2g00536 Chna-Chr2:37401661 tandem