Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00566 | ATGGCAGAGAAAAGAGATAAAAGTGAAGTTGTGGCTACACAAAGCTCTGAAATGGGACCATGTCTTGATGATGGAAGTTCGAGTATTCGAACCGCTGAGACGCTCTTGAGGTTGTTTCCTGTTGGACTATGTGTGGCTGCTCTTGTTGTCATGCTTAAGGATTCTGAGTCTAATGAATATGGTGCTTTAGCCTACTCCAACATCACTGCTTTCAGGTTTTTGGTGCATGCTAATGGCATATGTGCTGGTTATTCGCTACTATCGGCTGCTTACACGGCAATGCCTCGCCCTATAACCATGCCTCGAGCTTGGACCTTCTTCCTCCTTGACCAGGTCTTAACATACCTCATACTGGCTGCTGGTGCGGTGGCTACTGAGGTGGCATTTCTGACGTACAAAGGAGATGTGGCAGTGACATGGAGTGAGGTATGCGGGACCTACGGCCACTTTTGTAGACAAGCAACCGCGTCAATCATCATCACTTTTATGGTGGTGCTTTGCTACGTTTTGTTATCTCTTATCTCGTCGTATAGGCTCTTCAGCAAGTTTGATGCACCTGTAGGCTACCGTAACAAGGGGATCGAGATTGTTGACTTTGGAAATTAA | 606 | 46.53 | MAEKRDKSEVVATQSSEMGPCLDDGSSSIRTAETLLRLFPVGLCVAALVVMLKDSESNEYGALAYSNITAFRFLVHANGICAGYSLLSAAYTAMPRPITMPRAWTFFLLDQVLTYLILAAGAVATEVAFLTYKGDVAVTWSEVCGTYGHFCRQATASIIITFMVVLCYVLLSLISSYRLFSKFDAPVGYRNKGIEIVDFGN | 201 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00566 | 201 | PANTHER | CASP-LIKE PROTEIN 4A4 | 24 | 181 | - | - | |
| Chna2g00566 | 201 | Pfam | Casparian strip membrane protein domain | 27 | 167 | IPR006702 | - | |
| Chna2g00566 | 201 | NCBIfam | plant integral membrane protein TIGR01569 | 36 | 177 | IPR006459 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00566 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr2:39530633 | Chna6g03836 | Chna-Chr6:327495880 | dispersed | |
| Chna | Chna-Chr2:39530633 | Chna2g00572 | Chna-Chr2:39713543 | proximal |