AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00575 ATGGAATCGCATAGAAAGAGAATGAGACTGAAGAAAGAAAGTCTATTCTATTGTTTGGTACAAACGATGAATGGATGTGAGGAATATATGACGGAACCGGTTCTCATGTTTGGCTACAATATGGAACGAAATGTGAATGATACTTGTAAATATTCAGGCATCATTGAGGACTGCTGTTGTGACTACGAGAGCGTTAACAATGTTAATGGAGCAATTTTACATCCCTTGTTGCAACAGCTTGTTACAACTCCCTTCTTCCGATATTTTAAGGTGAAGTTATGGTGCGATTGCCCCTTCTGGCCTGATGATGGAATGTGCCGCCTGCGTGATTGCAGTGTATGCGAGTGTCCAGAACATGAATTCCCAGAATCTTTTAAGAAACCATCACCGTATATTCTTCCAAAAGATGATCCTGTATGTCAAGAAGGAAAGCCTGAGGCTACAGTTGACCGTACTCTAGATGCTAAGTCTTTTAATGGCTGGGTTGAAATAGATAATCGATGGACTCATGATGATGAAACTGATAATGGTGAAATGACGTATGTGAACCTGCAATTGAACCCTGAACGTCATACGGGTTACACAGGGCCATCAGCAAGAAGAATATGGGATGCTATATACTCAGAATATTGTCCAAGATATGCATATGGAGAGACGTGCCCAGAAAAGAAAGTACTATACAAGCTAATATCTGGTTTGCACTCCTCAATTTCTATCCATATAGGTGCAGATTATCTACTTGACGAGAGTAGCTATAAGTGGGGTCCAAATCCTGAATTGATGTATAATCGTGTCTTGAAACATCCTGATCGCGTGGAAAACTTGTACTTCACTTTCCTGTTTGTGCTTAGAGCTGTGACAAAAGCGGCTGCTTACCTGGATCAGGCCGAGTATGATTCTGGTAACCATGTGGAGGATCGTAGAGTCCAATCCTTAATTCGACAAATGGTTCACAATTCTGAACTGCAAGCTGCATGTGCTCTTCCATTTGATGAGGCTGAGCTGTGGCAAGGCCAAGGTGGACCCATACTCAGGCAACAGATCCAAAATCAGTTTCGAAACATCAGTGCACTCATGGACTGCGTAGGGTGTGAGAAGTGTCGTCTTTGGGGGAAACTTCAAGTTCTTGGTCTTGGAACTTCATTGAAGATTCTGTTCTCTGTCAATGATCAGAGTAACCCGGACCCGCATCTGCAGTTACAAAGAAATGAAGTGATTGCTTTAATTAATCTACTAAATCGGCTATCAGAATCCCTTGTATATGTTACTACAATAAAACTACCCGCTACAGATATCAGTTTGATTAACCAAGCTTGGGGAGTGATGGTTCCTTGGTGGAAGAACCTGTCAAAAGCTAACTGGTAA 1365 41.9 MESHRKRMRLKKESLFYCLVQTMNGCEEYMTEPVLMFGYNMERNVNDTCKYSGIIEDCCCDYESVNNVNGAILHPLLQQLVTTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPEHEFPESFKKPSPYILPKDDPVCQEGKPEATVDRTLDAKSFNGWVEIDNRWTHDDETDNGEMTYVNLQLNPERHTGYTGPSARRIWDAIYSEYCPRYAYGETCPEKKVLYKLISGLHSSISIHIGADYLLDESSYKWGPNPELMYNRVLKHPDRVENLYFTFLFVLRAVTKAAAYLDQAEYDSGNHVEDRRVQSLIRQMVHNSELQAACALPFDEAELWQGQGGPILRQQIQNQFRNISALMDCVGCEKCRLWGKLQVLGLGTSLKILFSVNDQSNPDPHLQLQRNEVIALINLLNRLSESLVYVTTIKLPATDISLINQAWGVMVPWWKNLSKANW 454
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00575 454 SUPERFAMILY ERO1-like 60 427 IPR037192 -
Chna2g00575 454 PANTHER ERO1-RELATED 45 426 IPR007266 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(InterPro)|GO:0015035(PANTHER)|GO:0016972(InterPro)|GO:0034975(PANTHER)|GO:0034975(InterPro)|GO:0071949(InterPro)
Chna2g00575 454 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 73 420 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
Chna2g00575 454 PIRSF ERO 10 451 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00575 K10950 ERO1-like protein alpha [EC:1.8.4.-]
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Event-related genes

Select Gene_1 Gene_2 Event_name
58566 Chna2g00575 Chna5g00915
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:39825805 Chna4g01558 Chna-Chr4:90976797 dispersed
Chna Chna-Chr2:39825805 Chna5g00915 Chna-Chr5:45798107 wgd