Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chna2g00609	ATGTCTTCTTCACTAGTCCCTTTAACGTCCACATTCACTTCATTTCCATCTAAACAGTTTGCCACATCTACCAACTCACAATTCATCTCCAAGGCTCGAACCAACCAAGCCCATGGTTTCAAAGTCTCATGCAATGCTTCACCTGAAGACAATGAGAACCAACTCATACTACCCGAAACACAAAAGCTTATACTACCCAATAATGTAGACCGAAGGAACCTCCTCGTGGGGCTTGGCGGCCTGTGCACGGCCGCCAGCCTTACTTCACTCCCGTCAGCCTTTGCAAGTCCGATTACGGCTCCTGATATCACGAACGTATGCAAGGATGCAAAAACAGGCTTTACGTCGGAGGGTGCTGTACGGACGGGTAAATGCTGCCCTCCGAGCCTCGGCAAGCCGATTCAATCGTTTGTGTTTCCAAGTAGAGAAAGGACCAGGGAGCGATGGCCAGCACATAAAGGGACGGATAAGCAGGTGCGGAGCTACAAGAAAGCCATTAAAGCCATTCGGGAACTCCCAGATGAGCACCCACACAGTTTCGTGAGCCAAGCTAAAATTCATTGTGCTTATTGTAACGGTGGTTATACTCAAGTCGATAGCGGTTTCCCAAATATCGAAATACAGATTCATAACTCGTGGCTCTTCTTTCCTTTCCATCGTTGGTACCTTTATTTCTATGAAAGAATTCTCAGAAAGTACAGTGGGGATGACGATTTCGCGTTACCTTACTGGAACTGGGACAATCCAGAAGGAATGACAATTCCTCAAATTTTTGTCGAAGAAAAAGATGATGACCCTCTCTTTGGAAACAAAAATCCTCTCTATGATGTTTACCGGGACGCTCGTCATCTCCCACCAAAAGTAGTAGATCTGTTCTTCAGTGGAGCCAAGTTAGCAGATAATTTTGCGAACGAACTAGACAGTGAAACACAGAAAGCCTGCAATCTTAGTATGGTGTACAAAGATTTGATCAGAAACGCAACTGATTGGGAAAGCTTCTTCGGAGGAGTATACACGGCTGGGGAGATGACTGGTAAGCCGTCAGTCGGGTCTGTGGAAAGCAATACTCACACTGCTGTACACGTATGGGTTGGTGACTCAAATAACACTAATAGAGAGGACATGGGCAACTTCTACTCTGCGGGATATGACCCTTTGTTTTACGTTCACCATGCAAACGTCGACCGTATGTGGAAACTGTGGAAGGATTTGGGCATTCCTGGACATTCAGAACCGACCGCGGATGACTGGTCAAATGCATCATATGTGTTCTATGACGAGAATGAGAATCTTGTACGTGTATACAACAAAGACTCTGTCAACATAGATAGGCTCAAATATGATTTTAAAGAGTCAAAGGCACCTTGGAAGAATAGTCGACCACCCCAACGTAAGGAGAAGTCCAAAGAATTATCGAGCGCACTTGTTGGAGAGACGAAAACGGTGGAGGAAGCCTTTAAGAAACCAGCGCGTCTGGACCCACTTCTCAAGGTTCGTGTGAAGAGGCCAGCTTATAACAGAAGTCCCGAGGAGAAGGCCAAGGCGAATGAGATTTTGTGTATAAACGGGATACAATTCAACAGCAACAAGTTTGTGAAATTCGACGTGTTTGTGAATGATAAAGTTGACATAAACGGAACGCTGCCAACAGCATGTGATCCTGAGTTTGCTGGTTCTTTTGCACAGGTTCCGCACAGTGGCAACCAACAAGGTGGAATGTTGATGCCAAGTGCAGTGAGGTTCGGGTTAAATGACCTTTTGGACGACACAAAAACGGAAGACGAAGAGTATGCTTTGGTGGCTTTGGTGGCAAGGGCAGGTTGCGAAGATCTCACTGTCTCAGGGATCGAGATCAAGTTGGTTCCTATTGGTTCCACTTAG	1881	46.04	MSSSLVPLTSTFTSFPSKQFATSTNSQFISKARTNQAHGFKVSCNASPEDNENQLILPETQKLILPNNVDRRNLLVGLGGLCTAASLTSLPSAFASPITAPDITNVCKDAKTGFTSEGAVRTGKCCPPSLGKPIQSFVFPSRERTRERWPAHKGTDKQVRSYKKAIKAIRELPDEHPHSFVSQAKIHCAYCNGGYTQVDSGFPNIEIQIHNSWLFFPFHRWYLYFYERILRKYSGDDDFALPYWNWDNPEGMTIPQIFVEEKDDDPLFGNKNPLYDVYRDARHLPPKVVDLFFSGAKLADNFANELDSETQKACNLSMVYKDLIRNATDWESFFGGVYTAGEMTGKPSVGSVESNTHTAVHVWVGDSNNTNREDMGNFYSAGYDPLFYVHHANVDRMWKLWKDLGIPGHSEPTADDWSNASYVFYDENENLVRVYNKDSVNIDRLKYDFKESKAPWKNSRPPQRKEKSKELSSALVGETKTVEEAFKKPARLDPLLKVRVKRPAYNRSPEEKAKANEILCINGIQFNSNKFVKFDVFVNDKVDINGTLPTACDPEFAGSFAQVPHSGNQQGGMLMPSAVRFGLNDLLDDTKTEDEEYALVALVARAGCEDLTVSGIEIKLVPIGST	626

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chna2g00609	626	Pfam	Polyphenol oxidase middle domain	413	461	IPR022739	GO:0004097(InterPro)
	Chna2g00609	626	ProSitePatterns	Tyrosinase CuA-binding region signature.	210	227	IPR002227	GO:0016491(InterPro)
	Chna2g00609	626	SUPERFAMILY	Di-copper centre-containing domain	120	455	IPR008922	-
	Chna2g00609	626	PRINTS	Tyrosinase copper-binding domain signature	356	367	IPR002227	GO:0016491(InterPro)
	Chna2g00609	626	PRINTS	Tyrosinase copper-binding domain signature	210	227	IPR002227	GO:0016491(InterPro)
	Chna2g00609	626	PRINTS	Tyrosinase copper-binding domain signature	383	401	IPR002227	GO:0016491(InterPro)
	Chna2g00609	626	PRINTS	Tyrosinase copper-binding domain signature	241	246	IPR002227	GO:0016491(InterPro)
	Chna2g00609	626	MobiDBLite	consensus disorder prediction	454	474	-	-
	Chna2g00609	626	ProSitePatterns	Tyrosinase and hemocyanins CuB-binding region signature.	384	395	IPR002227	GO:0016491(InterPro)
	Chna2g00609	626	PANTHER	TYROSINASE FAMILY MEMBER	69	581	IPR050316	-
	Chna2g00609	626	Pfam	Common central domain of tyrosinase	178	403	IPR002227	GO:0016491(InterPro)
	Chna2g00609	626	Pfam	Protein of unknown function (DUF-B2219)	489	620	IPR022740	GO:0004097(InterPro)
	Chna2g00609	626	Gene3D	-	96	454	IPR008922	-
	Chna2g00609	626	MobiDBLite	consensus disorder prediction	454	473	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chna2g00609	K00422	polyphenol oxidase [EC:1.10.3.1]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	58576	Chna2g00609	Chna5g00898
	58577	Chna2g00609	Chna5g00906
	58578	Chna2g00609	Chna7g02964

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chna	Chna-Chr2:42062996	Chna5g04515	Chna-Chr5:312182237	dispersed
	Chna	Chna-Chr2:42062996	Chna2g00610	Chna-Chr2:42312998	tandem
	Chna	Chna-Chr1:20129881	Chna2g00609	Chna-Chr2:42062996	transposed
	Chna	Chna-Chr5:189054487	Chna2g00609	Chna-Chr2:42062996	transposed
	Chna	Chna-Chr2:42062996	Chna5g00898	Chna-Chr5:44278532	wgd
	Chna	Chna-Chr2:42062996	Chna7g02964	Chna-Chr7:261031534	wgd