Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00610 | ATGTCTTCTTCACTAGTCCCTTTAACGTCCACATTCACTTCACTCCCATCTAAACAATTTGCCACATCCACCAACTCACAATTCATCTCCAAGGCTAGAACCAACCAAACCCATGGTTTCAAAGTCTCATGCAATGCTTCACCTGAAGACAATGAGAACCAACTCATACTACCCGAAACACAAAAGCTTATACTACCCAATAATGTAGACCGAAGGAACCTCCTCGTGGGGCTTGGCGGCCTGTGTACGGCCGCCAGCCTTACTTCACTCCCGTCAGCCTTTGCTAGTCCCATTACGGCTCCTGATATCACGAACGTATGCAAGGACTCAGCATCAGGCTTTAACACTGCTACTGCTATAAGGACAGGGAAATGCTGCCCTCCTAGCATTGGGAAGAAGGTTAAACCGTTTAAGTTTCCTAGAGAAAATATAACTCGAGTCCGATGGCCCGCACATTTGGGGACAAAACAGCAAGTGGATAAATACTTGAAAGCCATAGCAGCCATGAGGGCTCTCCCAGATGACCACCCGCACAGCTTCGCAAGCCAAGCTAAGATTCATTGTGCTTATTGTAACGGCGGTTATACTCAAGTCGATAGCGGCTTCCCTGATATCGATATCCAGATTCATAACTCGTGGCTCTTCTTCCCGTTCCATCGTTGGTACCTATATTTCTACGAGAGAATTCTCGGGAAATTGATCAATGATCCCACGTTCGCTTTGCCTTACTGGAACTGGGACGATCCTGTTGGCGGAATGACGATTCCAGACTTTTTCTTACCAGAAAACAGCCCTGCTTATGATGTTTACCGTGATGCTCGTCACAAGCCACCACTACTAGTTGATCTCGCCTTTGATGGCCGTGAGCGTGACGTTTCAAATGAAGTACAAAAACAATGTAATCTTAGCACTGTGTACCGAGATTTGGTGAGAAATGGAACTGATTCAAAGAGTTTCTTTGGAGGCGAATACGTAGCTGGGGATGCGCCTGTTGCAAATGGTGCCAAGTCGATTGGATCGGTCGAAGCTGGGACTCACACGGCTGTGCATAGATGGGTTGGTGACTCGACACAGCCTAATAATGAGGACATGGGTAACTTCTACTCCGCGGGGTATGACCCTGTGTTTTACATCCATCATTCGAATGTCGACCGTATGTGGAAACTCTGGAAGGATTTGGGCATTAAAGGACACAATGAACCGAGAGCTAAGGATTGGCTAGATGCATCATATGTGTTCTATGATGAGAATGAGGACCTTGTTCGTGTCTACAACAAAGATTGTGTCAATTTGAATAAGCTGAACTACGAGTACTTTGTGACAAAGGGTGAGATCGCATGGCGCAAGAGTCGACCTGGAAAACGTAACAAAAATGTGAAACGTCCAACAGTACCAATTGCAAAGGTGAAAACCGTGGAGCAACTGAGGTTCCCGGTTGGTGTAGACCCAGAGTTGAAGGTTCGTGTGAAGAGGCCAGCTGTGAACAGAACTGAAGCCCAGAAAGCACAAGCGAACGAGATTTTGATGATAAATGGAATAAGATTCAACAGTAACAAGTTTGTCAAGTTCGATGTGTTTGTGAATGACAATGTCGAGGATGGAACACTTACCACGCCTTGTGATCCGGAGTACGCGGGTGGTTTTTCACAAGTTCCACACAACGATAATATGAAAATGTTGATGACAAGTGCAGCTAGGTTCGGGTTAGATGAGATATTAGAGGACACAAATACTGAAGGCGAAGAATATGCATTGGTGACATTGGTCGCTAGGGCTGGCTGCGACGATGTCACGGTTGCGGACATCAAGATCGAGTTGGTTCCTATTGAGGATTAA | 1836 | 46.13 | MSSSLVPLTSTFTSLPSKQFATSTNSQFISKARTNQTHGFKVSCNASPEDNENQLILPETQKLILPNNVDRRNLLVGLGGLCTAASLTSLPSAFASPITAPDITNVCKDSASGFNTATAIRTGKCCPPSIGKKVKPFKFPRENITRVRWPAHLGTKQQVDKYLKAIAAMRALPDDHPHSFASQAKIHCAYCNGGYTQVDSGFPDIDIQIHNSWLFFPFHRWYLYFYERILGKLINDPTFALPYWNWDDPVGGMTIPDFFLPENSPAYDVYRDARHKPPLLVDLAFDGRERDVSNEVQKQCNLSTVYRDLVRNGTDSKSFFGGEYVAGDAPVANGAKSIGSVEAGTHTAVHRWVGDSTQPNNEDMGNFYSAGYDPVFYIHHSNVDRMWKLWKDLGIKGHNEPRAKDWLDASYVFYDENEDLVRVYNKDCVNLNKLNYEYFVTKGEIAWRKSRPGKRNKNVKRPTVPIAKVKTVEQLRFPVGVDPELKVRVKRPAVNRTEAQKAQANEILMINGIRFNSNKFVKFDVFVNDNVEDGTLTTPCDPEYAGGFSQVPHNDNMKMLMTSAARFGLDEILEDTNTEGEEYALVTLVARAGCDDVTVADIKIELVPIED | 611 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00610 | 611 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 210 | 227 | IPR002227 | GO:0016491(InterPro) | |
| Chna2g00610 | 611 | PANTHER | TYROSINASE FAMILY MEMBER | 69 | 557 | IPR050316 | - | |
| Chna2g00610 | 611 | Pfam | Protein of unknown function (DUF-B2219) | 477 | 606 | IPR022740 | GO:0004097(InterPro) | |
| Chna2g00610 | 611 | Pfam | Common central domain of tyrosinase | 178 | 392 | IPR002227 | GO:0016491(InterPro) | |
| Chna2g00610 | 611 | PRINTS | Tyrosinase copper-binding domain signature | 372 | 390 | IPR002227 | GO:0016491(InterPro) | |
| Chna2g00610 | 611 | PRINTS | Tyrosinase copper-binding domain signature | 345 | 356 | IPR002227 | GO:0016491(InterPro) | |
| Chna2g00610 | 611 | PRINTS | Tyrosinase copper-binding domain signature | 210 | 227 | IPR002227 | GO:0016491(InterPro) | |
| Chna2g00610 | 611 | PRINTS | Tyrosinase copper-binding domain signature | 241 | 246 | IPR002227 | GO:0016491(InterPro) | |
| Chna2g00610 | 611 | Pfam | Polyphenol oxidase middle domain | 404 | 452 | IPR022739 | GO:0004097(InterPro) | |
| Chna2g00610 | 611 | SUPERFAMILY | Di-copper centre-containing domain | 121 | 438 | IPR008922 | - | |
| Chna2g00610 | 611 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 373 | 384 | IPR002227 | GO:0016491(InterPro) | |
| Chna2g00610 | 611 | PIRSF | PPO-plant | 1 | 608 | IPR016213 | GO:0004097(InterPro)|GO:0046148(InterPro) | |
| Chna2g00610 | 611 | Gene3D | - | 96 | 440 | IPR008922 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00610 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 58579 | Chna2g00610 | Chna5g00903 | |
| 58580 | Chna2g00610 | Chna7g02916 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr2:42312998 | Chna5g04515 | Chna-Chr5:312182237 | dispersed | |
| Chna | Chna-Chr2:42062996 | Chna2g00610 | Chna-Chr2:42312998 | tandem |