Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chna2g00661	ATGTCACTGCTACCAACAACACCGGAAATTGTTCTTATATCCTCCCCTGATGGCCCAATCACCGCCTACGATCCATACACTGGAGCTGTCTTGGCTAGCTTCAGTGGCAGCCAGTGTCCTCGTAATGGCATCACTGTTATAAGCAGCAATCAGTTTGCTTGTTCACATGTTTCGGACACAGGTGTGGGCTACATTCATTTGTATAACTGGTGGTCTAAGTCTTGTGTGCAGAGTATTAATCTCCCTGAACCTGTAGCTCCTCTTGCTGCCACCAATGACGGGTTGTATATATTCTCAGGTGGTGTTTCGGGTCATATTCACTCGGTATTAGTACCTTCAGGTGACCTAATTCGATCAGTTTCGGCTCATGAGAAACCTGTTTCTTGCATTGTGATCAGTTGTGATGAATCATTGGTCATTTCGGGGGGTGATGATGGAACGATTGCAATGATTCCAATACTCTTGCTTCTAGATGTTTCACTTGACACTGAACCTGGATGTTCCAGTTTCACAAGGTTTACAGGACATGAACTATCGGTGACAGGATTAACTACTGGGATGGGTGTTATGATATCCAGCTCACTGGACTGGACTTGCAAAGTGTGGAACATTGCAAAAGGGACTCACCTCCAGACGGTGAAGTTTCAGGGAGAGATGTTGTGCTCGGTGTTGGATCCATCCGAGACCCAGTTGTATGCTGGTGGAATGGATGGAACGATATACAGAAAAGATCTCAAATTGGAGACAAGGCAACAGGTAGCAAGTGGAGGAGAGGTGGTGGTATGGGGCTGGAAGCACGACGGAGCAGTGGTGGCAATGGACATGTTGAATTATGGGCAGAGTTTGTTGACAGTTTCAGAGAACGGGCAAATTCATGTGTGGGAAGCAGAGGGTGATAAGATGATATGTAGTTTTAGTGAGAAGATCGGAGGCGTTAGTGGAGTGTTTGTGGTGAGAGATTGCAGTATTTTGGGGACAAAAGAGATTAAAAGTGAGGGATGTGGCAGTGAAGCGGAGGTTGGTATGGCAGCAACAGAGGTGGCGGAAATGGAAGAAGATTTGAGAGTGGTGGTAGAAGACCGGGGCAGAGCGACTACTAACCTTGAATCAGCAATTGAAATTCACAAAAAGCTGATGGAACTCATGCTCAAGGAAGCCAATGCGATTGCCAAATTTGAAGAGTCCATTAAGAAACAGATGAACATCTAA	1209	45.91	MSLLPTTPEIVLISSPDGPITAYDPYTGAVLASFSGSQCPRNGITVISSNQFACSHVSDTGVGYIHLYNWWSKSCVQSINLPEPVAPLAATNDGLYIFSGGVSGHIHSVLVPSGDLIRSVSAHEKPVSCIVISCDESLVISGGDDGTIAMIPILLLLDVSLDTEPGCSSFTRFTGHELSVTGLTTGMGVMISSSLDWTCKVWNIAKGTHLQTVKFQGEMLCSVLDPSETQLYAGGMDGTIYRKDLKLETRQQVASGGEVVVWGWKHDGAVVAMDMLNYGQSLLTVSENGQIHVWEAEGDKMICSFSEKIGGVSGVFVVRDCSILGTKEIKSEGCGSEAEVGMAATEVAEMEEDLRVVVEDRGRATTNLESAIEIHKKLMELMLKEANAIAKFEESIKKQMNI	402

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chna2g00661	402	PANTHER	WD-REPEAT PROTEIN 18	8	323	IPR045227	GO:0005656(PANTHER)\|GO:0006261(PANTHER)\|GO:0006364(PANTHER)\|GO:0097344(PANTHER)
	Chna2g00661	402	Gene3D	-	5	155	IPR015943	GO:0005515(InterPro)
	Chna2g00661	402	SMART	WD40-4	166	203	IPR001680	GO:0005515(InterPro)
	Chna2g00661	402	SMART	WD40-4	113	152	IPR001680	GO:0005515(InterPro)
	Chna2g00661	402	SMART	WD40-4	206	244	IPR001680	GO:0005515(InterPro)
	Chna2g00661	402	SMART	WD40-4	255	295	IPR001680	GO:0005515(InterPro)
	Chna2g00661	402	ProSitePatterns	Trp-Asp (WD) repeats signature.	190	204	IPR019775	-
	Chna2g00661	402	ProSiteProfiles	Trp-Asp (WD) repeats profile.	173	212	IPR001680	GO:0005515(InterPro)
	Chna2g00661	402	Pfam	WD domain, G-beta repeat	171	203	IPR001680	GO:0005515(InterPro)
	Chna2g00661	402	Pfam	WD domain, G-beta repeat	115	148	IPR001680	GO:0005515(InterPro)
	Chna2g00661	402	Gene3D	-	157	327	IPR015943	GO:0005515(InterPro)
	Chna2g00661	402	SUPERFAMILY	Quinoprotein alcohol dehydrogenase-like	10	309	IPR011047	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chna2g00661	K14829	pre-rRNA-processing protein IPI3

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chna	Chna-Chr2:50051785	Chna4g00771	Chna-Chr4:36260065	dispersed