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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00678 ATGGGTTGTTCTGGATCGTCGCTAAATAAGCAAGACCGAACGCCGAAAAAGATAAGGAAGCCAAAGCCATGGAAGTTTCCACGGCCAGTTACATGGAACCAGTTGGTCCAGATGCGTGATGAGTTCTGGGATACAGCTCCTCACCATGGCGGCAAGAAAGAAATATGGGATGCAATACATGCAGCAGCAGAGGCTGATATAGAGCTTGCTCAAGCAATTTTGGACAGTGCAGGAGTTATTCTTCACAAACCTGATATGACAGTTTGCTGTGATGAAAGAGGTACCAAATATGAAATACCTAGGTATGTGTTGAGCGAGCCAACAAACTTAATACAATTAAGTTGA 345 44.06 MGCSGSSLNKQDRTPKKIRKPKPWKFPRPVTWNQLVQMRDEFWDTAPHHGGKKEIWDAIHAAAEADIELAQAILDSAGVILHKPDMTVCCDERGTKYEIPRYVLSEPTNLIQLS 114
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00678 114 Pfam Ubiquitin-binding domain 16 112 IPR032752 -
Chna2g00678 114 Gene3D - 31 104 IPR038169 -
Chna2g00678 114 MobiDBLite consensus disorder prediction 1 25 - -
Chna2g00678 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 111 IPR039869 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00678 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:50869994 Chna3g01984 Chna-Chr3:148431791 dispersed
Chna Chna-Chr2:50869994 Chna1g01419 Chna-Chr1:117857435 transposed