Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00698 | ATGGGTGATGAAAAAGAAGTAAAAAATGATGAGAAAACTGAAAAGGGTTTAAAGAGTAAGAAGAAGAGAAAGGGTATTTTGGGAAGGATTTGGACTAGTTTGTTTAGGTTGGGTGGTGGTGATGATTTTGAGAAAAGGTTGCAATATATTACTAAAGAGGAAGGGAGTATTGTTATGAGGATGAAGAGGCGGGCTATGCGGTGGAGGAGGACTGCGCGCAATTTGATTATATTTTCGGTTCTTATTGAGAAATACGACCCTGACCCAGCAGCAAAAGCAGCTGCTGCATCTGTCCTTGCATCCAAATTGGGCGCGGATTCAGGCCTAAAAGTGTTTCTTGGGGACGAATCACAACAGAACCCATACGCCACAGGGAAGAGCAGTGATGCTGAGCTTCAACAATCCACTGGTCTTCGTAAACGAAATCAATCGAATACTCGATCTTCTGGAAGCAATGCAGGTCAACAATCCGCTAAAGAAGTGGCTCAATATGAAGAAAATGAGATTTCTGAGAATTCACCACACGGGCAGCTTGTTGTTAATCATCATAATGCTACATCTTTAGGTGCTCAAGATGGTGGTTGGATTGCTCGAATTGCTGCATTGCTTGTGGGAGAGGACCCCACACAATCGTACGCCCTCATATGTGGCAATTGCCATATGCATAATGGTCTTGCAAGAAAAGAGGAATTCCCCTTCATCACTTATTATTGTCCCCATTGCAATGCTCTGAATAAACCAAAGGACTCGGTACTACCTTCAAATATAATGTCTCCTGTTTCGGGATCTTCACCGGTAGCAAGCGCAGGTGTTAATTTGATTGAACAACATAAGGAGTCAAAAGTTGAGAAAGAATCTGCTGCTAGCAGTCCCGTGGCCGATGTGGTGGAAGAGAAAGATGCAACTGAAACTAAACTGACTGAGGATCCTTCTAGTCATTAG | 942 | 43.21 | MGDEKEVKNDEKTEKGLKSKKKRKGILGRIWTSLFRLGGGDDFEKRLQYITKEEGSIVMRMKRRAMRWRRTARNLIIFSVLIEKYDPDPAAKAAAASVLASKLGADSGLKVFLGDESQQNPYATGKSSDAELQQSTGLRKRNQSNTRSSGSNAGQQSAKEVAQYEENEISENSPHGQLVVNHHNATSLGAQDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEEFPFITYYCPHCNALNKPKDSVLPSNIMSPVSGSSPVASAGVNLIEQHKESKVEKESAASSPVADVVEEKDATETKLTEDPSSH | 313 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00698 | 313 | Pfam | Predicted integral membrane zinc-ribbon metal-binding protein | 195 | 245 | IPR019273 | - | |
| Chna2g00698 | 313 | MobiDBLite | consensus disorder prediction | 118 | 172 | - | - | |
| Chna2g00698 | 313 | MobiDBLite | consensus disorder prediction | 296 | 313 | - | - | |
| Chna2g00698 | 313 | MobiDBLite | consensus disorder prediction | 271 | 313 | - | - | |
| Chna2g00698 | 313 | PANTHER | ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK | 20 | 83 | IPR040115 | GO:0071782(PANTHER)|GO:0071786(PANTHER)|GO:0071786(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00698 | K23292 | endoplasmic reticulum junction formation protein lunapark |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 58597 | Chna2g00698 | Chna5g00764 | |
| 58598 | Chna2g00698 | Chna7g03114 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr2:53995582 | Chna5g00764 | Chna-Chr5:37372111 | wgd | |
| Chna | Chna-Chr2:53995582 | Chna7g03114 | Chna-Chr7:273896908 | wgd | |
| Chna | Chna-Chr2:53995582 | Chna7g03182 | Chna-Chr7:279562280 | wgd |