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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00734 ATGTGGAATTACCTACCAAATGTCCTTTCAAAACTAGAAGCCGAAGAGAAAGGTGCATTTGCATCCATTTGGGTGGATGATGATGGGTATGTAGCTGAGGGTCCAAATGTGAATGTGGGGTTCGTGACACATGAAAAAGAACTAATCCTGCCCTATTTTGACAAGATTTTAAGCGGGTGCACTGCAAAAAGGCTTCTTGAATTAGCTCCACAGTTGGTTGAAAATGGGCGTTTGAAGAGTGTCAAGGTTGGGAATATAACAGTCGAGGATGCTAAACGAGCTGATGAGATGATGTATATTGGTAGCACGCTTCCTGTACTTTCAATCATTGAGTGGGATGAAAAGCCTATTGGCGATGGAAAAGTTGGAGAATTGACAATGGCATTATCGGACCTTGTTTGGAGGACATGGTGGCAGGTCCTGTAA 426 43.19 MWNYLPNVLSKLEAEEKGAFASIWVDDDGYVAEGPNVNVGFVTHEKELILPYFDKILSGCTAKRLLELAPQLVENGRLKSVKVGNITVEDAKRADEMMYIGSTLPVLSIIEWDEKPIGDGKVGELTMALSDLVWRTWWQVL 141
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00734 141 FunFam D-alanine aminotransferase 1 139 - -
Chna2g00734 141 PANTHER AMINO-ACID AMINOTRANSFERASE 3 134 IPR050571 GO:0019752(PANTHER)
Chna2g00734 141 Gene3D - 1 138 IPR043132 -
Chna2g00734 141 Pfam Amino-transferase class IV 3 111 IPR001544 GO:0003824(InterPro)
Chna2g00734 141 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 2 136 IPR036038 GO:0003824(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00734 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:56124443 Chna6g03135 Chna-Chr6:276680510 dispersed