AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00740 ATGGCAGAAGAATACTCTCTAGCTGATACTTCAAAGCTTCTTCAAGCAGCTTCTGATTTTTCCTTTGATCCTGGTACTCGATCAGAAGCTGCTGTTAAGGAATTTCTTAGCTCCTTTCCCCTTCCTCTTATTATCAAGTACCAACTTCTTCTTTTATTTTTAATTGTTGATCTATATTTTTTATTCATAATTGCTTTGCAAACAAAAGGAGATGTGCCTGGTTTGGAGGACGCACTGATTGATTGTTTAGAGAAGATATTTAGAACAAAATATGGGGCCTCTCTCATCCCACATTTCATGCCTTTCATCGTGGTCGGCCTGCAAGCATACTCTCAGAGAGTCAGAAATTTGTCGTGCAAAACGGTCTCAAGCCTTTTGGAGAATCTTGAAGACAATACTGGCTTAGCTACTTCCCTGATCAACGAGAATGGTGTGTATCCCCTTCTGCTTAATTGTCTCATTGACGGTGATGAACAAGTGGCTGTTGCTGCAACAGAAGCAATCAGAAATATAGCGCGCTCTCAACAGGGGATAGAGATCATATTCCCGGCTACTCCTGATGACAGCACAGATATTACAAAGCTAGCAGCAAGATGTTCTTCACTGGGACGAGTACGCGTTTTAGCATTGATAGTGAAACTATTTTCTGCTTCAAGTGCAGCTGCAACTTTAGTTCACAACTCAAATCTTCTTGGTCTCTTGGAGGCAGAAGTTCGCAATGCTAATGACACACTTATAACTTTGAGTGTTTTGGAGCTCCTTTATGAGTTGGCTGAGGTCCATCATGGAATGGAATATGTTCTTGGGACGAATATCTTGCAGCTGCTTATTTCAATAATCAGGAATTCTTCTGCTGAATCGATGTTGAGATCAAGGGCAATGATGATAAGTGGGCGGCTGTTATCGAAAGAGAACGTTTTCACGTTTATAGATGAATCTGGTGTTAAAGCTGTGATTTCAGCTATTGATGAACGGCTTTCATTACTAGATAGTCAAGATGAAGATGAATGTGAATGTGGTCTTGAAGCCTTAGGTCAAATAGGGTCATCAACTAAAGGAGCTGTATTGCTACTTTCAAACACATCTGCTGCTCAACATGTTGTTAACACTGCTTTTAACTTACATGGTCGTGGCAGACAACTGGCAGCATTGCATTCTCTTGGGAACATTGCAGGAGAAACTCGGCCCGAGGAAAACAAATTGCTGAATTCTGATGCCGAAGAAAGCCTTCGTAGATTGGTTTATGAAACAGCATCCAGCACTCCAAAGCTCATACCTTCGGGTCTTGTTCTTGCAATTCTTAAACTCGAGACTGAATTTCGGATCGCGGGTTATAGGTTGATAACAGGATTGGCTGCTAGACCATGGTTTCTGGTGGAAATCTGTTCCAGACAAGAGATAATAAACATATTGACGGATTCATATACGGAAACAACTAAAATAGGTATGGAGGCCAAATTCAACTGTTGTGAGGCGATTTATAAGGCTATTGCATTCTCGTCTAAACTTCTTGGTGATCCAGCTCTTTCCGAGACAGCAGAAAAGCTTTCGGAAGCTATTAAAAAGGGACCTTATCTTGCAAAAGGACGACAACTTGAAGCACAACCTGAAGTCGCAACTGCTGATAGATTTTAG 1635 41.28 MAEEYSLADTSKLLQAASDFSFDPGTRSEAAVKEFLSSFPLPLIIKYQLLLLFLIVDLYFLFIIALQTKGDVPGLEDALIDCLEKIFRTKYGASLIPHFMPFIVVGLQAYSQRVRNLSCKTVSSLLENLEDNTGLATSLINENGVYPLLLNCLIDGDEQVAVAATEAIRNIARSQQGIEIIFPATPDDSTDITKLAARCSSLGRVRVLALIVKLFSASSAAATLVHNSNLLGLLEAEVRNANDTLITLSVLELLYELAEVHHGMEYVLGTNILQLLISIIRNSSAESMLRSRAMMISGRLLSKENVFTFIDESGVKAVISAIDERLSLLDSQDEDECECGLEALGQIGSSTKGAVLLLSNTSAAQHVVNTAFNLHGRGRQLAALHSLGNIAGETRPEENKLLNSDAEESLRRLVYETASSTPKLIPSGLVLAILKLETEFRIAGYRLITGLAARPWFLVEICSRQEIINILTDSYTETTKIGMEAKFNCCEAIYKAIAFSSKLLGDPALSETAEKLSEAIKKGPYLAKGRQLEAQPEVATADRF 544
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00740 544 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 1 544 IPR019538 GO:0005829(PANTHER)|GO:0043248(InterPro)
Chna2g00740 544 Pfam Proteasome non-ATPase 26S subunit 123 540 IPR019538 GO:0043248(InterPro)
Chna2g00740 544 Gene3D - 74 423 IPR011989 -
Chna2g00740 544 SUPERFAMILY ARM repeat 81 414 IPR016024 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00740 K06692 26S proteasome non-ATPase regulatory subunit 5