Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00747 | ATGACAACACACGGAGTGAAGAAGATGGCATTAACATCACAAGCATACTTAGACGGATCATCAGTGAAACAAACGAAATCATTAATAACAGAGCTATGTCGTTTGTTTTACAACTTAGGTTGGGTTGGTGGTACCGGTGGAAGTATCACTGCTAAAGTGCACGATGATTCTGTTCCTAAGTCTGATCAGCTTATTATCATGTCTCCTTCTGGTGTGCAAAAGGAAAGAATGGTTGAAGAAGATATGTATGTGTTATCTTCAACTGGAGATATTTTGTTTACGCCATCACCGAAACCTTATCCTCATAAACCTCCAAAGTGTTCAGACTGTGCCTCTCTTTTCATGAAGGCTTATAATATGCGTAATGCTGGTGCAGTCATTCATAGTCATGGAATGGAATCTTGTATTGTTACAATGCTTGATCCTTTGGCAAAAGAGTTTAGGATCACTCATATGGAGATGATTAAAGGGATTCAAGGGCATGGCTATTATGACGAGCTTGTGGTTCCCATAATAGAAAACACTGCTCATGAGAGAGAGTTGACTGAATATCTTGCTGCAGCGATTGAAGCGTACCCAAAAACAACTGCTGTACTGGTCCGAAATCATGGTATCTATGTATGGGGCGATACCTGGATTAGTGCCAAAACTCAGCGCTGTATTGTTCTGGATATTGAAGGGACAACTACTCCTATATCATTTGTCACCGATGTTCTTTTCCCGTATGCCTGTAAAAATGTTCAAAGGCATTTGGAAGCAACATACGATACTGATGCTACTCAAGATGATATTAAGTTGTTGCGCTCTCAAGTACAAGATGATTTACAAAACGGAGTTGCGGATGCTGTTCCTATCCCATCTGATGAGGCGGGAAAAGAGAAGGTGATAGCTGCTTTGGTCGCTAATGTTGAAGGAATGATAAAATCTGACAGGAAAATTACTTCCTTAAAACAGTTACAAGGTCACATATGGCAAACTGGATTTGAGCAAAATGAACTGAAAGGTGTGGTTTTTGATGATGTTCCTAGCGCTCTTGAAAAGTGGCATGCTTCTGGTATAAAGGTGTATATATATTCTAGTGGTAGCAGATTAGCACAGAGGCTGTTATTTGGATATACCAATTACGGGGACTTGAGAAACTACTTGTGCGGGTTTTTTGACACCACAGTGGGGAACAAGAAAGAAACAAAGAGTTATGTTGAAATATCGGAATCACTTGGAGTTCATAAGCCATCTGAAGTCCTGTTTGTAACGGATATCTATCAAGAAGCTGTAGCTGCAAAGGCAGCTGGCTTGGAGGTGACGATCTCTGTTCGGCCCGGAAATGGACCACTTCCCAAGAATCACGGTTTCAAGACAATCAAGTCTTTTTCGGAGATATGA | 1383 | 40.85 | MTTHGVKKMALTSQAYLDGSSVKQTKSLITELCRLFYNLGWVGGTGGSITAKVHDDSVPKSDQLIIMSPSGVQKERMVEEDMYVLSSTGDILFTPSPKPYPHKPPKCSDCASLFMKAYNMRNAGAVIHSHGMESCIVTMLDPLAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAHERELTEYLAAAIEAYPKTTAVLVRNHGIYVWGDTWISAKTQRCIVLDIEGTTTPISFVTDVLFPYACKNVQRHLEATYDTDATQDDIKLLRSQVQDDLQNGVADAVPIPSDEAGKEKVIAALVANVEGMIKSDRKITSLKQLQGHIWQTGFEQNELKGVVFDDVPSALEKWHASGIKVYIYSSGSRLAQRLLFGYTNYGDLRNYLCGFFDTTVGNKKETKSYVEISESLGVHKPSEVLFVTDIYQEAVAAKAAGLEVTISVRPGNGPLPKNHGFKTIKSFSEI | 460 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00747 | 460 | Gene3D | - | 22 | 226 | IPR036409 | - | |
| Chna2g00747 | 460 | Gene3D | - | 328 | 460 | IPR023214 | - | |
| Chna2g00747 | 460 | SUPERFAMILY | AraD-HMP-PK domain-like | 23 | 218 | IPR036409 | - | |
| Chna2g00747 | 460 | Gene3D | - | 232 | 327 | - | - | |
| Chna2g00747 | 460 | PANTHER | ENOLASE-PHOSPHATASE E1 | 214 | 460 | - | GO:0019509(PANTHER)|GO:0043874(PANTHER) | |
| Chna2g00747 | 460 | FunFam | Probable bifunctional methylthioribulose-1-phosphate dehydratase-enolase-phosphatase E1 | 22 | 225 | - | - | |
| Chna2g00747 | 460 | Pfam | haloacid dehalogenase-like hydrolase | 219 | 431 | - | - | |
| Chna2g00747 | 460 | Pfam | Class II Aldolase and Adducin N-terminal domain | 29 | 217 | IPR001303 | - | |
| Chna2g00747 | 460 | NCBIfam | acireductone synthase | 219 | 459 | IPR023943 | GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro) | |
| Chna2g00747 | 460 | Hamap | Probable bifunctional methylthioribulose-1-phosphate dehydratase-enolase-phosphatase E1. | 14 | 460 | IPR027505 | - | |
| Chna2g00747 | 460 | SMART | Aldolase-II-2 | 27 | 222 | IPR001303 | - | |
| Chna2g00747 | 460 | SUPERFAMILY | HAD-like | 218 | 460 | IPR036412 | - | |
| Chna2g00747 | 460 | CDD | HAD-EP | 220 | 441 | IPR023943 | GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro) | |
| Chna2g00747 | 460 | SFLD | enolase-phosphatase | 219 | 459 | IPR023943 | GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro) | |
| Chna2g00747 | 460 | FunFam | Probable bifunctional methylthioribulose-1-phosphate dehydratase-enolase-phosphatase E1 | 232 | 328 | - | - | |
| Chna2g00747 | 460 | NCBIfam | methylthioribulose 1-phosphate dehydratase | 29 | 218 | IPR017714 | GO:0005737(InterPro)|GO:0019509(InterPro)|GO:0046872(InterPro) | |
| Chna2g00747 | 460 | SFLD | C1.5: HAD, Beta-PGM, Phosphatase Like | 219 | 459 | - | - | |
| Chna2g00747 | 460 | FunFam | Probable bifunctional methylthioribulose-1-phosphate dehydratase-enolase-phosphatase E1 | 328 | 460 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00747 | K16054 | methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1 [EC:4.2.1.109 3.1.3.77] | ||||
| Chna2g00747 | K09880 | enolase-phosphatase E1 [EC:3.1.3.77] | ||||
| Chna2g00747 | K08964 | methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 58623 | Chna2g00747 | Chna5g00665 | |
| 58624 | Chna2g00747 | Chna5g00713 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr2:57276693 | Chna5g00713 | Chna-Chr5:35393631 | wgd | |
| Chna | Chna-Chr2:57276693 | Chna5g00665 | Chna-Chr5:33841061 | wgd |