Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00756 | ATGATCATATCCAATCTAATCTTTTCTCCAACAAACTCAAAAACAAACAAACAAAAACACACATTTTACATGGCTGGCACCTTAACAACCGGATTTCCAACGGCTTCCTTAACTCCTCCGGTCTCTATTCGCCGGAACTTTATCTCGACCTCTTCAAAACTAAACATCAGGTCATTCAGATCATATGGATCGGTTAATTTAAGGTCCAGATTCAACCGAATTGTGTGTGAAGCTCAGGAGGCAACATCTGTTCAAGTACTTCCCGTGACTGATGGAACATGGCAATCTCTAGTCCTCGACTCTGCTCTTCCCGTACTGGTCGAATTCTGGGCTCCATGGTGTGGGCCATGTCGCGTGATCCACCCTGTGGTTGACGACCTCGCGAAAGAATACACTGGCAAGCTCACATGTTACAAGTTAAATACTGATGAGAGTCCCTCAATCGCAACCAAATATGGTATAAGAAGCATCCCGACCATCATGATCTTTAAAGACGGAGAAAAGAAAGACGCCGTCATTGGTGCAGTTCCACGATCAACTCTGTGTACCTCCATTGAAAAGTTCTTGTAG | 570 | 44.39 | MIISNLIFSPTNSKTNKQKHTFYMAGTLTTGFPTASLTPPVSIRRNFISTSSKLNIRSFRSYGSVNLRSRFNRIVCEAQEATSVQVLPVTDGTWQSLVLDSALPVLVEFWAPWCGPCRVIHPVVDDLAKEYTGKLTCYKLNTDESPSIATKYGIRSIPTIMIFKDGEKKDAVIGAVPRSTLCTSIEKFL | 189 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00756 | 189 | CDD | TRX-family | 93 | 181 | - | - | |
| Chna2g00756 | 189 | Gene3D | Glutaredoxin | 85 | 189 | - | - | |
| Chna2g00756 | 189 | PRINTS | Thioredoxin family signature | 153 | 164 | - | - | |
| Chna2g00756 | 189 | PRINTS | Thioredoxin family signature | 105 | 113 | - | - | |
| Chna2g00756 | 189 | PRINTS | Thioredoxin family signature | 113 | 122 | - | - | |
| Chna2g00756 | 189 | ProSiteProfiles | Thioredoxin domain profile. | 75 | 189 | IPR013766 | - | |
| Chna2g00756 | 189 | PANTHER | GEO12009P1 | 64 | 189 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Chna2g00756 | 189 | FunFam | Thioredoxin | 79 | 189 | - | - | |
| Chna2g00756 | 189 | ProSitePatterns | Thioredoxin family active site. | 106 | 124 | IPR017937 | - | |
| Chna2g00756 | 189 | Pfam | Thioredoxin | 86 | 186 | IPR013766 | - | |
| Chna2g00756 | 189 | NCBIfam | thioredoxin | 90 | 188 | IPR005746 | GO:0015035(InterPro) | |
| Chna2g00756 | 189 | SUPERFAMILY | Thioredoxin-like | 81 | 188 | IPR036249 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00756 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 58631 | Chna2g00756 | Chna5g00644 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr2:2518244 | Chna2g00756 | Chna-Chr2:57544822 | dispersed | |
| Chna | Chna-Chr2:57544822 | Chna7g02833 | Chna-Chr7:251795877 | dispersed | |
| Chna | Chna-Chr2:57544822 | Chna5g00688 | Chna-Chr5:34621681 | wgd | |
| Chna | Chna-Chr2:57544822 | Chna5g00644 | Chna-Chr5:32915036 | wgd |