Gene detail

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Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chna2g00771	ATGGCAAATTTCTTAGCTCAGTATGAATCTATCAAGAACTCATGCGATCACCTCGTCATTGCCGTTAAAGATGTGAGTGACTTGTGGCCTCTTGTCAAGAAGGAATTTGAGGAACGGCTTCCATTTAAAAGAGTTGTATTAAACAACAAAACGCATAACACTGTAACTGTCAATAACCTGCCAGCTGAGTTTATACTTACAACAGACTCAAGAATCCGCAGCAAGTTTTCTCCAGAGCAATTGGTCTTTTGGTTTCAAGAACCAATTGCAATTGTGGTTCTCGTGACATGTGAGGACTTAGACGAGTTTAAAACAATACTAAAACCACGTCTGAAACTAGTTTTGCAAAATGAAGAGGAGTGGTTCATTGTATTTGTGTCCAAAGCTAAACCTGATGATGATCAATCAAACAAGATGGCGAAAAAAGTTTATGCTAGACTTGAAGTTGATTTCAACTCAAGAAAGAGGGAACGATGCGTCAAATTTGATCAATTTGAACCTGAAGCAACTTTTTGGGAAGACTTGGAACTAAAACTCACGGACTGCCTCAAAAACACTTTTGAAAAGCGCATCCAGTTTTATGAGGACGAGCTTCGTAAACTCAGTGAACAACGTATAATGCCAGTTTGGAGCTTCTGTAATTATTTTATTCTCAAGGAAAGCCTTGCATTCATGTTTGAAATGGCTCATCTATACGAAGACTCATTGCGGGAATATGATGAACTAGAGATCTATTACTTACAAACAGTTAATTATGCTGCTGGCATACGTAAGGACTTTGGAGGAATGGACCATGGAGACGATCAATCTGCAATGCTAAAAGCTGGAAACAAACAACTGACACAGATAGTTCAAGATAGTTCCTTTAGGGAGTTTGAATTTCGACAGTACTTATTCGCTCGTCAAGCTAAGCTGCTTTTTAATTTACAACGCCCATTTGAGGTTGCATCAAGGGGGTATTCGTTCATAGTTAGTTTCTCGGAAGCATTAGCTCTACATGAGAGTATCTTGCCCTTATGTACAAGGGAAGTATGGGTCCTAACCTCGTGCTTGAGCTTGGTTAATGCAACTGCTGACCATCACAAAGATGGAATAGTGACACCAGAAATAGAAAAAGAATATTATCGTATGCGTGGAGAGTTATATTCTCTATGCCGAGTTAAGTTCATGCGACTTGCATATTTGATTGGGAACGGGTCTAATATAGAAAGAAGTCCAGTCAACAGTGCTTCACTTAGCATGGTACCTTGGCCTAAGCCAGCAACTTGGCCTTCAGTTCCTTCTGATGCTTCATCTGAGGTTGTTGCGCAAGAAAAGATGATTCTTCAAGATAAACCAAGGATGAAGCATTTTGGTATTCATAGAAAACAGTTGCCTCTTGAACCTTCTTTTCTTCCGCATGAGGCTAATCGTCGAAGACCGTCTAGTTCTGTTGGAAATATGTTTGAACTGTCAGGCAACTCAGGTTCAGAAGCAGAGACATTTTCTTCACTTACACCACCTCCATCTTCGGTGTCAAGGACCACCTCTATACCAGTAAACTTTGAGAGCACAGTTGAAACCATGAGACTAGCGGAATTTTTTGTGGCTGCCAAGCATGCTCTCCGTAAAACTATTTCTGATCCTAGTTTGTGGAAATCATTAACATCGTTAGGGGACTTTGAGAAAATGTATATGGAGCTATCTAAGGGTGCTTCTGATAATTATCATCTTTCATGGTGGAAAAGACACGGGGTTGTTCTCGAGGGTGAAATTGCAAATATTTTATTTAAACATGGTAATTACGATCTAGCAGCAAAATTATACGAAAAAGTTTGTGCTCTTTACTCTGGTGAAGGATGGCAAGATTTATTAGCAGACTTGCTTCCTAATTTAGCTGAATGCCAAAATATACTCAATGATCAACCTGGTTACCTATCATCCTGTGTGAGATTACTTTCACTTGACAAAGGTTTATTTTTGACTAATGAGCGCCAAGCTTTTCAGTCAGAAGTAGTCCGTCTAGCACACGGTAAAATGAGTGACCCCGTGCCTCTAGATGTGTCATCATTAATAACATTTTTTGGCAATTTGGGTCCACCTGTGGAGCTATGTGACGGTGATCCGGGTACCTTACCTGTAACATTATGTAGCGAATTCCCAGATGACATCACTCTTGAATCACTTAGTCTTACTTTGAATGCTACCAATAACGCCGATGAACGTGTTAAGGCGATCAGGACCTGTGGTGTGACGATATTGAACCCTGGTAGAAATACAATTACCCTTTCGTTGCCCCCACAGAAACCTGGCTCCTATGTCTTGGGTGTTCTTACAGGGCAGATTGGTCATTTACGATTTAGGTCTCATGGTTATTCCAGAGGTGGACCTGCAGATATTGATGATCTTATGAGTTATGATAAGCCAACGAGGCCGATTTTAAAGGTGTCCAAACCAAGGCCTCTTATTGATCTTGCTGCTGTGGTTTCGTCTGCATTACTGATGAATGAGCCTCAGTGGGTTGGGATAAGTGTTACACCATTAAATTACTCCCTTAAGGATGCAATTTTGCACATTGAAAGTGGTCCAGGGTTAAAAATTGAGGAGTCACCTGCCATTGAAATGGAAAACTATGTTGATACTTTATGTAATGCAGATGGATTGAGGGATACAAATGGTGATAGTAATAACGCTGCTTCTGTAAGAAAAGAATTTGCAAAACTTACTTTAAGGGATGGTAGTATAGAGTTACCAGACTGGGCCAGCAGTATCGTCAGCGTTATATGGATTCCTGTTTGTGCCACTAGTGACACGCTAGCAAAAGGAATATCTTCAGGGGCAATCTCTTCACAAAGAACGAGTGTGGTTGATGGACTGAGGACGTTAAATCTGAAACTTGAATTTGGCGTGTCACATAATCAGATATTTAAAAGGACTGTGCCTGTTCATTTCACTGACCCGTTCCACATCAGCACACTTGTTGCAGAGCAGGGCAGTGATGGTGCTTTGCTTTTACAGGTGATACTAAACTCAAAGGTAAAGGCCTCATTAACTATTCATGATGCTTGGTTAGATCTACAAGATGGTTTTTCTCATACCACAAAAGGTGACGGGAGACCAACATCTAACTTGTTGCCGCTTGTGGTTCCTGCAACATCTAGAACTGGAATTTTCTTTGGTATATCCATGGCAACTACAACCACCGAAGATGAAGGGAAAGTGGTGCATCCTGATACAATATTAAATATTAAGTATTCAGTTTCTGGCGATAGAAACATAGGATCTCATACTCCTGTATCTCTGGAAACTAAAGACTCGAAGGGTGATGAAAAACCATTGTTGTTGACATTCAGGAGTGTTCTTGTTATACGGCGGCCGGTGTTGGAACCTTTTTTGGTTGTTGGTTTTGTTCCTCTTCCTTCGGATGGACTTAGAGTTGGGCAGGTAATCACAATGAAATGGAGAGTGGAAAGGTTAAAGTATGTGGACGAGGAGTTATTGTATGAAGTCAAGGCGAACACAAAAAATTGGATGATTGCTGGTAGGAAACAAGGCCATGCCACTCTCTCCACAAAGCAAGGATCAAGAACTGAAATTACGATATTGTGTGTACCACTAGCTGCTGGTTATGTTCGTCCACCACAACTCCACTTGCCAAACGTGAATAAGGCGAATATATGCTGTAATCCTGCTAGCCCTCATTTGGTGTGTGTCCTGCCTCCACCTCTGAGCTCATCATTTTGCATTCCAGCATGA	3735	40.99	MANFLAQYESIKNSCDHLVIAVKDVSDLWPLVKKEFEERLPFKRVVLNNKTHNTVTVNNLPAEFILTTDSRIRSKFSPEQLVFWFQEPIAIVVLVTCEDLDEFKTILKPRLKLVLQNEEEWFIVFVSKAKPDDDQSNKMAKKVYARLEVDFNSRKRERCVKFDQFEPEATFWEDLELKLTDCLKNTFEKRIQFYEDELRKLSEQRIMPVWSFCNYFILKESLAFMFEMAHLYEDSLREYDELEIYYLQTVNYAAGIRKDFGGMDHGDDQSAMLKAGNKQLTQIVQDSSFREFEFRQYLFARQAKLLFNLQRPFEVASRGYSFIVSFSEALALHESILPLCTREVWVLTSCLSLVNATADHHKDGIVTPEIEKEYYRMRGELYSLCRVKFMRLAYLIGNGSNIERSPVNSASLSMVPWPKPATWPSVPSDASSEVVAQEKMILQDKPRMKHFGIHRKQLPLEPSFLPHEANRRRPSSSVGNMFELSGNSGSEAETFSSLTPPPSSVSRTTSIPVNFESTVETMRLAEFFVAAKHALRKTISDPSLWKSLTSLGDFEKMYMELSKGASDNYHLSWWKRHGVVLEGEIANILFKHGNYDLAAKLYEKVCALYSGEGWQDLLADLLPNLAECQNILNDQPGYLSSCVRLLSLDKGLFLTNERQAFQSEVVRLAHGKMSDPVPLDVSSLITFFGNLGPPVELCDGDPGTLPVTLCSEFPDDITLESLSLTLNATNNADERVKAIRTCGVTILNPGRNTITLSLPPQKPGSYVLGVLTGQIGHLRFRSHGYSRGGPADIDDLMSYDKPTRPILKVSKPRPLIDLAAVVSSALLMNEPQWVGISVTPLNYSLKDAILHIESGPGLKIEESPAIEMENYVDTLCNADGLRDTNGDSNNAASVRKEFAKLTLRDGSIELPDWASSIVSVIWIPVCATSDTLAKGISSGAISSQRTSVVDGLRTLNLKLEFGVSHNQIFKRTVPVHFTDPFHISTLVAEQGSDGALLLQVILNSKVKASLTIHDAWLDLQDGFSHTTKGDGRPTSNLLPLVVPATSRTGIFFGISMATTTTEDEGKVVHPDTILNIKYSVSGDRNIGSHTPVSLETKDSKGDEKPLLLTFRSVLVIRRPVLEPFLVVGFVPLPSDGLRVGQVITMKWRVERLKYVDEELLYEVKANTKNWMIAGRKQGHATLSTKQGSRTEITILCVPLAAGYVRPPQLHLPNVNKANICCNPASPHLVCVLPPPLSSSFCIPA	1244

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chna2g00771	1244	Pfam	Trafficking protein particle complex subunit 10, TRAPPC10	1154	1213	IPR022233	-
	Chna2g00771	1244	Coils	Coil	184	204	-	-
	Chna2g00771	1244	PANTHER	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1	9	1243	IPR045126	GO:0006891(PANTHER)\|GO:0034498(PANTHER)\|GO:0048193(InterPro)\|GO:1990071(InterPro)\|GO:1990071(PANTHER)
	Chna2g00771	1244	MobiDBLite	consensus disorder prediction	473	507	-	-
	Chna2g00771	1244	MobiDBLite	consensus disorder prediction	466	507	-	-
	Chna2g00771	1244	SUPERFAMILY	TPR-like	584	639	IPR011990	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chna2g00771	K20307	trafficking protein particle complex subunit 10

Event-related genes

Select	Gene_1	Gene_2	Event_name
	58635	Chna2g00771	Chna5g00601

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chna	Chna-Chr7:136392018	Chna2g00771	Chna-Chr2:58522498	transposed
	Chna	Chna-Chr2:58522498	Chna5g00601	Chna-Chr5:30453753	wgd