AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00794 ATGCAGCAACCAAACAAAACCCTGGAATCAGACCTCCCATCACTCGCCACAATCAAAGTCAAATCATCCTCCCCTCGTTTCCGATCAACCACCACTTCATCAACCGAGACACCAACCGCCGGAGCCCAGCGTCGTATCGGCATCGCAGTCGACTTATCCGACGAATCCGCATTCGCTGTCAAATGGGCCGTTCACCAATACCTCCGTCCCGGCGACGCCGTGATCCTAATCCACGTCCGGCCCACTTCGGTCCTTTACGGGGCCGATTGGGGCTCCGTCGATTTAGCACTTTCTGACAACGACCCAGATGAACAAACTAAAGAGAAGCTAGAAAATGACTTTGATTTGTTCACTAGTAATAAAAGTGCTGATATAGCTGGGCCGTTAGTTGAGGCCGGGATTCCGTATAAGATACATATAGTGAAGGATCATGATATGAAGGAGAGACTGTGTTTGGAAGTTGAGAGGTTGGGTTTAAGTGCTGTGATTATGGGGAGTAGGGGCGTTGGGAGGATGAGAAGCGGCGAAGGCGACGGGAGGTTAGGGAGTGTTAGTGATTATTGTGTCAGGCATTGTGTTTGTCCTGTTGTTGTTGTGAGGTTTCCTGATGAGAAGGAGGTTGCGCATGAGGGTGGGGCGGTTGTGAAAGTGGCCAAGGGGGGTGATGACGAGGAGGTGGATGAGGATGAGAGTGAGTTTCATGATGCCAGCGATGAGCGGAAATGGTAA 729 51.03 MQQPNKTLESDLPSLATIKVKSSSPRFRSTTTSSTETPTAGAQRRIGIAVDLSDESAFAVKWAVHQYLRPGDAVILIHVRPTSVLYGADWGSVDLALSDNDPDEQTKEKLENDFDLFTSNKSADIAGPLVEAGIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGVGRMRSGEGDGRLGSVSDYCVRHCVCPVVVVRFPDEKEVAHEGGAVVKVAKGGDDEEVDEDESEFHDASDERKW 242
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00794 242 PANTHER OS01G0783500 PROTEIN 6 241 IPR044162 -
Chna2g00794 242 MobiDBLite consensus disorder prediction 21 42 - -
Chna2g00794 242 PRINTS Universal stress protein signature 178 200 IPR006015 -
Chna2g00794 242 PRINTS Universal stress protein signature 43 61 IPR006015 -
Chna2g00794 242 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 44 202 - -
Chna2g00794 242 MobiDBLite consensus disorder prediction 21 41 - -
Chna2g00794 242 Pfam Universal stress protein family 44 200 IPR006016 -
Chna2g00794 242 Gene3D HUPs 32 210 IPR014729 -
Chna2g00794 242 CDD USP-Like 45 199 - -
Chna2g00794 242 MobiDBLite consensus disorder prediction 217 242 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00794 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:60220238 Chna7g02359 Chna-Chr7:199559035 dispersed
Chna Chna-Chr2:60220238 Chna9g01981 Chna-Chr9:86455030 transposed