AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00824 | ATGGTTTCATTCGTTGTAGCAATTGTTGTTCTACTTTCCCCTTTGGCAGCACCAATGGTTTCAGAAATCGACAAAGATGCACAAACATTTCCGGTTGGTAATGTAAGCAATTTGGACGAGGATATAAATGATGAAAAGGTTAACACTATGCCTATGCGGCGAAAGTTGTTTGAGACATCAAATTGCGAGCCTCATTGTATGGATGAAAAAGAAAATGATTCTTTTTCATGGGAGGATGATATAGAACCAATTCCATTTGCAGTTTCTAAAGCAGAGACGGGTGATGGTGGTGGTATCGATAATACAACAATTATCATTGTTGTTATTTCTACTGCAGCTTTAACATTTCTTCTGGCTACATTGCTCTTTTGCTGGTATACTAAGACTTATGGTGGTGCAGAAAATGATGAGAAGTCGTTTGTCAGCTTAAGTTCTTCACAAAAAGCTTCTTATAGTATGCATGGTAACTCTGTTAAGGATCCTGTAAACACTGTCAATACAAGTTCAGACTTGCACAAAACATTTTCTTCTATCAATTCAAGTGTATCATTAGGAATACCATTAGATCCTGCACCAGATCGTTTAAGTGCTGCTGGAGTGCCTCCTCTAAAGCCGCCACCTGGCAGACCCGACCTGGCTCTAAAGACACCACCTGGACGGAAAGATTTGTCTTTACGTTGTCCAACTGTAAATACTTCTTCACCTCCTAATATATCGCCAGTTGGTGCTGCGGGCCCACTTAGTTCTGAGTCTATTAGAGCTCCGTCAGCTAGACGGGCCCCATCAGCAAGACGCCCACCACCACCTCCACCACCATCTGGAAAAGCACCCCCACTGCCACCACCACTAAAGAAAGGTCCAATCCCACCACCTGCACCTCCTCCAGGTGGTGTTAGACCTCCACCTAAACCACCTGGTGCAGGGTTCAAACCGCCCCGCCCTTCAAATGGATCAGACGAGGGCGATGGTGATGGTGATGATTCTAATAAAGCTAAGCTAAAACCGTTCTTTTGGGATAAGGTTATGACCAACCCTGATCAAGCAATGGTTTGGAATCAAATTCGAGCAGGCTCATTCCAGTTTAACGAAGAAATGATAGAAAATTTATTCGGATATAATGCCGCGGCTGAGAAAAACAAAGCCAACAATAAGAAGAGTTCAGCATCACAAGATCCCTCTTCGAATTTTGTTCAGATCATTGATGGAAAGAAGGCACAAAATTTGTCAATTCTTCTAAAAGCGCTAAATGTGACAACTAATGAAGTTTGTGATGCACTAAATGAAGGAAGTGAGCTTCCAGTCGAACTTATTCAAACGTTGCTAAAGATGGCACCAACCGGAGAGGAAGAACTGAAGCTAAGACTATATAACGGGGATATTTCTCGCCTTGGAACAGCAGAGCGGTTTCTAAAAAAGTTGGTTGAAATACCATTTGCTTATAAAAGGCTTGAGTCGTTGCTTTTTATGTGCACACTGCAAGAGGAGCTAGATATAATCAAGGAGTCCTTCGAAACTTTAGAGGCTGCTTGTAAAGAACTTAAGAAAAGCCGGTTGTTCCTTAAACTCTTAGAAGCAGTTTTAAAAACAGGGAACCGTATGAACGACGGAACATTTCGGGGGAGCGCACAAGCATTCAAACTCGACACACTCTTAAAACTTGCAGATGTGAAAGGTGTTGATGGTAAAACGACTCTTTTACATTTTGTAGTAGTGGAGATCATTCGTGCCGAAGGTGTAAGAGCTTCGAAAACCAAGGATCTAGAAGAATCAGCTAATAGCTCACCAGATTCTGATGAATATTATCGTAATCTTGGCCTTCAAGTGGTTTCAAGTTTGTGTGACGAGCTTGAAGATGTTAAGAAAGCAGCTGTTCTTGATTCTGATGGGTTGACGGGCACAGTGTCTAAATTTGGTCATGCACTAATAAAATCTCGTGAGTTTTTAAACACGGATTTGAAGAAAATAGACAACGGTGAGAGCGACAATGATGACTCTGACAATGATGACAATGATGATGAGTTTTCTGTGATTTTGTCAAATTTTGTGCAAGATACTGAAAAGGATGTGATGTGGATGCTTGAGGAAGAAAAGAGAATAATGGCGCTTGTAAAGAATACAGCGGATTATTTTCATGGACAGACTGGCAAAGATGAGGGGTTGCGGTTGTTTGTGATTGTTCGTGATTTTCTGCTAATCTTGGAGAAGGTGTGTAAAGAGATTAAAACCAATCCTCTTGTAAGACCACCGAAGACTGCAGAGAAGAAAGATAATCCATCATCTGAGACAGCAGAGAAGAAAGATGTTTCGTTGTCTGAGACAAAAGAGGCTTCATCTCCTAGGACGTCAAAGAAAGAAGATGTTTCAGAACCTAGGACACAAGACACGGATGTTTTGCAACGTGAGACACAAGAAGTTGATGGTCTGCGAGATTTTTGGGATAATGTGGATCCACAGCTTGATATGCCAGAAAATGAGGATTCACTAAATAAGGCATTGGAAACTGAAGATTCAGAAAACGAGAAACAAGAAATTGAGGAATCGAGACGTGAAATAGAGGAAATATATGAGTTACTTCATGAGACACAGGATACTAAATCTCCATATAAGATACATGAAATTGATGAAAATCGACATGAGACGCATTTGGGACATGAAACACCTGAACCTGATGCTTCACCGGATGAAAAACAGGAAAATGATGATTTTCAACCTAAGACAGCGAAAACTGATTACTCACGACATGAGAAACAGGAAACGGATTATTCTAGTACACATGAACCTGATTATTCACAAAGTACGACTGATAAAACTAATGATTTGCGACCAGAGACACATCAAACTTATGACACACAAGAACAACATGGGATTCATGAGGATGTTGATTTGTGCTCTAAAACAGAAGAAAATGTTGATACACAACCTAAGACACATCAAGATGATGATTCACAACATGAGACACAGGACCATGATGATTTGCAAACCGAGACTGAAAATAAAGATGTTGAGTCAACGAGTGAAAGATCTTCAAAACCCCACCAACCCCCTTTTCGTGTTCCACATGAGCGATTAATTCCTGCTATTGCAATGAGACGGGTGGATACTTTCAGTTCTAGCTCAAGTTCAGATGATGATTGA | 3135 | 40.86 | MVSFVVAIVVLLSPLAAPMVSEIDKDAQTFPVGNVSNLDEDINDEKVNTMPMRRKLFETSNCEPHCMDEKENDSFSWEDDIEPIPFAVSKAETGDGGGIDNTTIIIVVISTAALTFLLATLLFCWYTKTYGGAENDEKSFVSLSSSQKASYSMHGNSVKDPVNTVNTSSDLHKTFSSINSSVSLGIPLDPAPDRLSAAGVPPLKPPPGRPDLALKTPPGRKDLSLRCPTVNTSSPPNISPVGAAGPLSSESIRAPSARRAPSARRPPPPPPPSGKAPPLPPPLKKGPIPPPAPPPGGVRPPPKPPGAGFKPPRPSNGSDEGDGDGDDSNKAKLKPFFWDKVMTNPDQAMVWNQIRAGSFQFNEEMIENLFGYNAAAEKNKANNKKSSASQDPSSNFVQIIDGKKAQNLSILLKALNVTTNEVCDALNEGSELPVELIQTLLKMAPTGEEELKLRLYNGDISRLGTAERFLKKLVEIPFAYKRLESLLFMCTLQEELDIIKESFETLEAACKELKKSRLFLKLLEAVLKTGNRMNDGTFRGSAQAFKLDTLLKLADVKGVDGKTTLLHFVVVEIIRAEGVRASKTKDLEESANSSPDSDEYYRNLGLQVVSSLCDELEDVKKAAVLDSDGLTGTVSKFGHALIKSREFLNTDLKKIDNGESDNDDSDNDDNDDEFSVILSNFVQDTEKDVMWMLEEEKRIMALVKNTADYFHGQTGKDEGLRLFVIVRDFLLILEKVCKEIKTNPLVRPPKTAEKKDNPSSETAEKKDVSLSETKEASSPRTSKKEDVSEPRTQDTDVLQRETQEVDGLRDFWDNVDPQLDMPENEDSLNKALETEDSENEKQEIEESRREIEEIYELLHETQDTKSPYKIHEIDENRHETHLGHETPEPDASPDEKQENDDFQPKTAKTDYSRHEKQETDYSSTHEPDYSQSTTDKTNDLRPETHQTYDTQEQHGIHEDVDLCSKTEENVDTQPKTHQDDDSQHETQDHDDLQTETENKDVESTSERSSKPHQPPFRVPHERLIPAIAMRRVDTFSSSSSSDDD | 1044 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00824 | 1044 | MobiDBLite | consensus disorder prediction | 317 | 331 | - | - | |
| Chna2g00824 | 1044 | MobiDBLite | consensus disorder prediction | 938 | 1017 | - | - | |
| Chna2g00824 | 1044 | MobiDBLite | consensus disorder prediction | 826 | 923 | - | - | |
| Chna2g00824 | 1044 | MobiDBLite | consensus disorder prediction | 747 | 1044 | - | - | |
| Chna2g00824 | 1044 | SMART | it6-source | 323 | 748 | IPR015425 | - | |
| Chna2g00824 | 1044 | Coils | Coil | 496 | 516 | - | - | |
| Chna2g00824 | 1044 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 323 | 759 | IPR015425 | - | |
| Chna2g00824 | 1044 | Pfam | Formin Homology 2 Domain | 328 | 732 | IPR015425 | - | |
| Chna2g00824 | 1044 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 267 | 742 | - | - | |
| Chna2g00824 | 1044 | MobiDBLite | consensus disorder prediction | 261 | 311 | - | - | |
| Chna2g00824 | 1044 | Gene3D | Formin, FH2 domain | 332 | 776 | IPR042201 | - | |
| Chna2g00824 | 1044 | MobiDBLite | consensus disorder prediction | 748 | 813 | - | - | |
| Chna2g00824 | 1044 | Coils | Coil | 830 | 864 | - | - | |
| Chna2g00824 | 1044 | MobiDBLite | consensus disorder prediction | 193 | 331 | - | - | |
| Chna2g00824 | 1044 | MobiDBLite | consensus disorder prediction | 199 | 213 | - | - | |
| Chna2g00824 | 1044 | PANTHER | FORMIN-RELATED | 100 | 1044 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00824 | K28090 | formin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 58645 | Chna2g00824 | Chna5g00553 | |
| 58646 | Chna2g00824 | Chna5g00557 | |
| 58647 | Chna2g00824 | Chna6g03783 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1587776 | Chna | Chna2g00824 | Chna-Chr2:63837249 | Chna8g01734 | Chna-Chr8:147447918 | |
| 1623975 | Chna | Chna3g04006 | Chna-Chr3:285541954 | Chna2g00824 | Chna-Chr2:63837249 | |
| 1632187 | Chna | Chna2g00824 | Chna-Chr2:63837249 | Chna5g00553 | Chna-Chr5:28282440 | |
| 1632353 | Chna | Chna2g00824 | Chna-Chr2:63837249 | Chna6g03783 | Chna-Chr6:324339924 |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Chna4g00941 | . | 25 | 339 | FH2 protein (formin) gene family | AT5G07740 | 73.734 | 2.32e-165 | 508.0 | |
| Chna00039044g00018 | . | 432 | 880 | FH2 protein (formin) gene family | AT5G67470 | 73.111 | 0.0 | 638.0 | |
| Chna00040951g00003 | . | 772 | 847 | FH2 protein (formin) gene family | AT3G25500 | 64.474 | 9.50e-25 | 97.1 | |
| Chna00001616g00050 | . | 432 | 880 | FH2 protein (formin) gene family | AT5G67470 | 70.779 | 0.0 | 624.0 | |
| Chna6g03416 | . | 449 | 884 | FH2 protein (formin) gene family | AT5G67470 | 69.178 | 0.0 | 600.0 | |
| Chna4g00945 | . | 1232 | 1614 | FH2 protein (formin) gene family | AT5G07740 | 72.396 | 0.0 | 562.0 | |
| Chna4g00942 | . | 1223 | 1614 | FH2 protein (formin) gene family | AT5G07740 | 64.631 | 1.46e-161 | 494.0 | |
| Chna7g03490 | . | 985 | 1036 | FH2 protein (formin) gene family | AT1G31810 | 78.846 | 1.24e-19 | 82.0 | |
| Chna7g01956 | . | 554 | 1026 | FH2 protein (formin) gene family | AT3G25500 | 71.63 | 0.0 | 690.0 | |
| Chna6g02725 | . | 460 | 849 | FH2 protein (formin) gene family | AT5G67470 | 52.956 | 1.81e-132 | 413.0 | |
| Chna00004003g00056 | . | 597 | 808 | FH2 protein (formin) gene family | AT5G54650 | 54.206 | 1.91e-61 | 211.0 | |
| Chna4g02766 | . | 614 | 677 | FH2 protein (formin) gene family | AT3G25500 | 57.576 | 1.44e-15 | 71.2 | |
| Chna8g01532 | ACH | 1 | 759 | FH2 protein (formin) gene family | AT1G70140 | 39.552 | 1.27e-150 | 454.0 | |
| Chna6g01123 | ACH | 312 | 749 | FH2 protein (formin) gene family | AT4G15200 | 52.539 | 2.57e-141 | 432.0 | |
| Chna5g00553 | ACH | 422 | 900 | FH2 protein (formin) gene family | AT5G54650 | 63.838 | 0.0 | 603.0 | |
| Chna4g00944 | . | 1232 | 1614 | FH2 protein (formin) gene family | AT5G07740 | 61.198 | 7.15e-144 | 449.0 | |
| Chna3g00150 | . | 573 | 1025 | FH2 protein (formin) gene family | AT3G25500 | 54.978 | 1.23e-157 | 481.0 | |
| Chna6g01393 | ACH | 10 | 759 | FH2 protein (formin) gene family | AT1G70140 | 42.623 | 2.88e-177 | 528.0 | |
| Chna7g03740 | . | 75 | 309 | FH2 protein (formin) gene family | AT3G32400 | 46.888 | 2.83e-58 | 205.0 | |
| Chna2g02401 | ACH | 3 | 345 | FH2 protein (formin) gene family | AT2G25050 | 54.493 | 9.70e-133 | 421.0 | |
| Chna7g03736 | . | 712 | 1092 | FH2 protein (formin) gene family | AT2G25050 | 47.135 | 1.09e-100 | 322.0 | |
| Chna00039108g00003 | . | 712 | 1103 | FH2 protein (formin) gene family | AT2G25050 | 58.163 | 1.30e-142 | 452.0 | |
| Chna2g00824 | ACH | 420 | 869 | FH2 protein (formin) gene family | AT5G54650 | 63.462 | 0.0 | 568.0 | |
| Chna4g00943 | . | 25 | 341 | FH2 protein (formin) gene family | AT5G07740 | 73.27 | 5.77e-159 | 505.0 | |
| Chna6g02653 | . | 460 | 849 | FH2 protein (formin) gene family | AT5G67470 | 52.956 | 1.81e-132 | 413.0 | |
| Chna5g00557 | ACH | 720 | 900 | FH2 protein (formin) gene family | AT5G54650 | 56.021 | 3.85e-54 | 185.0 | |
| Chna00001175g00101 | . | 588 | 1011 | FH2 protein (formin) gene family | AT3G25500 | 68.779 | 0.0 | 575.0 | |
| Chna7g03901 | . | 704 | 1096 | FH2 protein (formin) gene family | AT2G25050 | 43.373 | 4.51e-89 | 305.0 | |
| Chna6g03783 | ACH | 437 | 881 | FH2 protein (formin) gene family | AT5G54650 | 56.416 | 6.78e-151 | 464.0 | |
| Chna8g02392 | . | 1 | 431 | FH2 protein (formin) gene family | AT1G31810 | 70.302 | 0.0 | 688.0 | |
| Chna3g04006 | . | 762 | 847 | FH2 protein (formin) gene family | AT3G25500 | 60.227 | 3.06e-25 | 102.0 | |
| Chna7g03904 | . | 719 | 1092 | FH2 protein (formin) gene family | AT2G25050 | 50.0 | 1.97e-111 | 351.0 | |
| Chna8g01734 | ACH | 435 | 862 | FH2 protein (formin) gene family | AT5G54650 | 58.14 | 3.81e-154 | 491.0 | |
| Chna3g00161 | . | 28 | 224 | FH2 protein (formin) gene family | AT5G67470 | 26.971 | 6.98e-06 | 45.4 | |
| Chna4g00946 | . | 1215 | 1644 | FH2 protein (formin) gene family | AT5G07740 | 75.909 | 0.0 | 686.0 | |
| Chna7g03737 | . | 62 | 809 | FH2 protein (formin) gene family | AT5G07650 | 42.031 | 0.0 | 591.0 |