Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna2g00846 | ATGGTGTCTACTGCTAAGATCAAATCCGTTGATTTCTACAGGAAAATACCAAGAGATTTGACAGAGGCGTCACTGTCAGGTGCCAGCTTGTCTATCGTGGCCGCTCTTTCCATGATGTTTTTATTTGGAATGGAACTACATAATTATCTGAGTATCAGTACATCAACTTCTGTCATAGTTGACAGAAGTTCTGATGAGGATTACTTACGGATTGATTTCAATATTAGTTTTCCAGCCTTATCCTGTGAGTTTGCATCTGTGGACGTGAGTGATGTACTGGGAACTAACAGGTTGAACATAACCAAAACAGTCCGCAAATATTCAATTAATAAGCATCTACAAACTACTGGCTCTGAGTTTGACTCTGGATCAGTTGGTCATGTAGTCAAGCATGGTGATGAGGCTGACGAGGATTATGGTGAAGGATCCTTAACTCTAAATTCACGTAACTTTGATAGGGTTTCTCATCAGCATTCAATTGTGGTTGTAAATTTCTATGCTCCTTGGTGCTATTGGAGTAACCGTCTGAAACCTTCATGGGAGAAGGCAGCCAAAATTATAAGAGAAAGGCATGATCCAGAAATTGATGGTCGTATTATTATGGGAAAGGTGGACTGTACTGAAGAAGTTGATCTGTGTAGAAGTCACCACATACAGGGTTATCCATCTATTCGCATATTCCGCAAGGGCAGTGATGTCAGGGATGAGCATGGGCACCACGAGCATGAGTCATATTATGGTGACCGTGATACAGAAACCTTGGTAGATACTATGGAAAAATTGGTTGCACCTATTGCGGTGGAATCCAATCTGGCCTTGGAGGATAAATCTGGCACAGCTACAGAGACTGCTAAAAGACCTGCACCGCGTGAAGCAGGATGTAGAATCGAAGGGTTTGTTCGAGTCAAGAAGGTTCCTGGTAATCTTGTAATTGCGGCCCGTTCTGCAGCCCACTCCTTTGATGCTTCCCGGATGAACATGTCGCATGTAATTTCTTCATTTTCTTTTGGTAAGAAGATCACTCCGAGGGCGATGAGTGATATTAAGCGAATACTACCTTACATTGGCGTAAGCCATGACAAGTTGAATGGCAAGACATATCTCACTGACCCAGACGATCATGCAAATGTTACAGTAGAGCATTATCTTCAAGTTGTAAAGACTGAGGTAATGAGGTCATCTCATCAACTGATTGAGGATTACGAGTATACAGCACATAGTAGCTTGGTACATGCTTATTCGATCCCTGTTGTGAAGTTCCATTATGAGCCATCCCCAATGCAGGTCTTAGTTACAGAAAATCCCAAATCATTTTCTCATTTCATCACCAACGTCTGTGCTATTATCGGTGGTGTTTTCACGGTTGCTGGGATACTGGATTCGATTCTGCACAATACATTGAGACTAGTGAAAAAAGTTGAACTAGGGAAGAACTTTTAG | 1440 | 42.01 | MVSTAKIKSVDFYRKIPRDLTEASLSGASLSIVAALSMMFLFGMELHNYLSISTSTSVIVDRSSDEDYLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKYSINKHLQTTGSEFDSGSVGHVVKHGDEADEDYGEGSLTLNSRNFDRVSHQHSIVVVNFYAPWCYWSNRLKPSWEKAAKIIRERHDPEIDGRIIMGKVDCTEEVDLCRSHHIQGYPSIRIFRKGSDVRDEHGHHEHESYYGDRDTETLVDTMEKLVAPIAVESNLALEDKSGTATETAKRPAPREAGCRIEGFVRVKKVPGNLVIAARSAAHSFDASRMNMSHVISSFSFGKKITPRAMSDIKRILPYIGVSHDKLNGKTYLTDPDDHANVTVEHYLQVVKTEVMRSSHQLIEDYEYTAHSSLVHAYSIPVVKFHYEPSPMQVLVTENPKSFSHFITNVCAIIGGVFTVAGILDSILHNTLRLVKKVELGKNF | 479 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna2g00846 | 479 | Pfam | Endoplasmic reticulum vesicle transporter | 288 | 460 | IPR012936 | - | |
| Chna2g00846 | 479 | Gene3D | Glutaredoxin | 131 | 289 | - | - | |
| Chna2g00846 | 479 | SUPERFAMILY | Thioredoxin-like | 138 | 261 | IPR036249 | - | |
| Chna2g00846 | 479 | CDD | PDI-a-family | 144 | 258 | - | - | |
| Chna2g00846 | 479 | FunFam | Protein disulfide-isomerase 5-4 | 131 | 286 | - | - | |
| Chna2g00846 | 479 | Pfam | Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) | 7 | 97 | IPR039542 | - | |
| Chna2g00846 | 479 | ProSiteProfiles | Thioredoxin domain profile. | 114 | 263 | IPR013766 | - | |
| Chna2g00846 | 479 | PANTHER | ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN | 1 | 473 | IPR045888 | GO:0005783(PANTHER)|GO:0030134(PANTHER) | |
| Chna2g00846 | 479 | Pfam | Thioredoxin | 145 | 243 | IPR013766 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna2g00846 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 58655 | Chna2g00846 | Chna5g00542 | |
| 58656 | Chna2g00846 | Chna6g03801 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1587793 | Chna | Chna2g00846 | Chna-Chr2:65362335 | Chna4g03611 | Chna-Chr4:281108758 | |
| 1621949 | Chna | Chna2g01254 | Chna-Chr2:103418793 | Chna2g00846 | Chna-Chr2:65362335 | |
| 1628987 | Chna | Chna8g01898 | Chna-Chr8:157137770 | Chna2g00846 | Chna-Chr2:65362335 | |
| 1632194 | Chna | Chna2g00846 | Chna-Chr2:65362335 | Chna5g00542 | Chna-Chr5:27896569 | |
| 1632358 | Chna | Chna2g00846 | Chna-Chr2:65362335 | Chna6g03801 | Chna-Chr6:325422272 |