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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00883 ATGGCTCAAACACTGGAAGCCATCAAGGGTGGTGGTGGATCCATCAAAGTTGGAACCACCGGCACCATCAATGCCTTAATGTCAAGGGAACTACAATCGATCAAAGTTGCATCTCCAAGGGCAGTCCCATTGACACTCAAATCTCCAAAACGAGCCTTGGAACCTAATGAGGCTACTACGAGTACGACTCCTAAATCAAGTGTACAATCAGATGAAGCAAGCACTAGCAGCAGCGGTAATACAATGACTGAAAAACACACCAGTGTTCCTCATAAAACCAAGCACTATCATGCTAGAAGAGATAGTCGAAATCCTTTTCTTCGTTCTGATAGTGCATCAGTTGATGGAAATGGAACTCCTAATCGTAGGAAGAATGTTAAGAAGGGGTCTTGCATGGTTGAAATAGTGGACGTGAAATGTGGAGTTCCTGATAAAATGTGGGTGAATCCCATAACTAATAAGCTGAAGAAATTCACTTTCTCGAAGCTCTCTGAAACCAATGGCGTTAAGTAA 513 42.88 MAQTLEAIKGGGGSIKVGTTGTINALMSRELQSIKVASPRAVPLTLKSPKRALEPNEATTSTTPKSSVQSDEASTSSSGNTMTEKHTSVPHKTKHYHARRDSRNPFLRSDSASVDGNGTPNRRKNVKKGSCMVEIVDVKCGVPDKMWVNPITNKLKKFTFSKLSETNGVK 170
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00883 170 MobiDBLite consensus disorder prediction 107 124 - -
Chna2g00883 170 MobiDBLite consensus disorder prediction 38 126 - -
Chna2g00883 170 MobiDBLite consensus disorder prediction 54 86 - -
Chna2g00883 170 PANTHER BNAA10G09140D PROTEIN 1 167 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00883 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
58657 Chna2g00883 Chna5g00529
58658 Chna2g00883 Chna6g03810
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1587829 Chna Chna2g00883 Chna-Chr2:67631124 Chna5g00529 Chna-Chr5:27262238
1632371 Chna Chna2g00883 Chna-Chr2:67631124 Chna6g03810 Chna-Chr6:325773941