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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g00943 ATGGAGGGCGGAGGAGCAAGAGTAGTTCATCCAGCAGTGGAACCGCTGTCTTATCTGATCGGCACATGGAAAGGAACTGGAGAAGGTGGTTTTCCCACCATTTCTTCCTTCTCTTACGGTGAAGAGCTCACCTTCACTCATCCCGAGAAGCCTGTAATAGCTTATTCCCAAAAGACTTGGAAGTTGAATTCTGGAGAGCCCATGCATGCTGAGAGCGGCTACTGGAGGCCAAAGCCTGATGGAACTATTGAGGTTGTCATTGCGCAGAGCACTGGTCTTGTCAAGATTCAGGTTATTGAGTTCACCTTATCAAATTATAGTTTAGTAATTATGTCCCAATCCCTGTTATTTCTCTTGGAATTGTATTATATTGCTGTGGCGTTGGTCAGTTATGGTTCAGTGTTGCATAATTCCTGCATCCGCGAAACTGATTAA 435 45.06 MEGGGARVVHPAVEPLSYLIGTWKGTGEGGFPTISSFSYGEELTFTHPEKPVIAYSQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVKIQVIEFTLSNYSLVIMSQSLLFLLELYYIAVALVSYGSVLHNSCIRETD 144
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g00943 144 PANTHER THAP4 PROTEIN 7 113 IPR045165 -
Chna2g00943 144 Pfam THAP4-like, heme-binding beta-barrel domain 13 98 IPR014878 -
Chna2g00943 144 SUPERFAMILY Lipocalins 9 98 IPR012674 -
Chna2g00943 144 CDD lipocalin-heme-bd-THAP4-like 13 98 IPR014878 -
Chna2g00943 144 Gene3D - 8 116 IPR012674 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g00943 - -