AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g01013 ATGGAAACTGCAAAAGAACAGTTTTTGAAGGAATATGGTGAATCATATAGTTATGATCACAAGAACATTGATGATATTCGAGCTAATGAGTTTAAAAGACTTGATGGGAGTGTGTATTTGGATCATGGTGGTGCAACTTTGTATTCAGAGTTACAGATGGATGCAATATTTAAGGATCTTACTTCTAATGTTTATGGCAATCCTCATAGTCAAAGCAGCTCTAGCTTGGCTACCTCAGACATTGTAGAAGATGCTCGTCTTCAGGTTCTCAATATCTGTAATGCGTCTCCAAAAGAGTATAAGTGTATATTCACTTCTGGCGCAACAGCAGCTCTTAAACTCGTTGGTGAGGCTTTTCCTTGGAGCAGTCAGAGCACTTTCATGTATACAATTGAGAATCACAACAGTGTCCTTGGGATCAGAGAATACGCTCTTGATAAAGGGGCTGGAGCATTAGCAATAGACTTTGTTGAAGATACAGAATCTTCCATTAAGGTTTTACAGCATCCACTAAAGAAGCGAAGTGACGTTAGGACATTGGAAAAAGAGCCTACTGATCATGCATACAATTTATTTGCGTTCCCCTCGGAGTGTAATTTCTCAGGAGCAAGGTTCAATCTTGATTTAATAGACATGATTAAGGAAGATTCAGAACAATTATTGGAAGGTTCTGAACTTTCTAGGGGGTGCTGGCTGGTTTTGCTTGATGCTGCAAAAGGATGTTCCACAGACCCTCCGGATTTATCAAAACATAAGCCAGACTTCGTTGCCATCTCATTTTACAAGCTTTTTGGCTATCCAACTGGACTTGGAGCTTTGATAGTTCGAAATGAAGCTGCAAAGTTACTAAAGAAGACCTACTTCAGTGGAGGTACAGTGGCTGCATCAATTGCAGATATCGACTATGTGAAAAGAAGAGAAGGTATTGAGGAATCATTTGAAGATGGAACACTATCATTCATAAATATAGCATCTATTCGCCATGGATTTGAGATCCTCGATACTTTGACCACAATATCCATATCACGGCATACATCATCTCTTGCAAGGTATACGAGAAATATGCTTTTGGCACTAAGGCATGCTGATGGGAAGGAAGTTTGCAAAATATATGGCATGGAGTATATAAAGGCAGTATATAGTGGACTTGGTCCTGTGGTTTCTTTCAATTTGAAGCGCCCTGATGGTTCTTGGGTTGGCCATCGTGAAGTGGAAAATTTAGCTTCCTTATCTGGAATTCAGCTACGGACAGGGTGCTTTTGCAATCCTGGTGCATGTTCCAAGTATCTTGGTTTATCTCATTCAGATCTTCTATCCAACATTGAGGCTGGACATGTTTGCTGGGATGATTATGATATATTGAATGGGAAACCTACTGGGGCCATTAGAGTGTCTTTTGGTTATATGTCAACGTTTGAAGATGCTTGGAAATTCATGAACTTCATTGTAAGCTCATTTGTCTTGTTGCCTAGCACTAGTAGACATCTTTCGCGAATAAGATCCAGCTCTATCCAGTCTGCACCAGAAGGTGCAGATTGCAGAACACCGACAAAACATCATCTTACGTCAATTGTTGTGTATCCAATAAAGTCATGTGCGGGATTCAGAGTGGATAGTTGGCCTCTAAGCAGTACTGGATTGCTATATGATCGAGAGTGGCTTCTCAAAAGCATGAATGGTGAAATTCTTACGCAGAAGAAGGTACCTGAAATGTACTTTATTGGCACAAAGATCGACCTCAAAACAGGAATACTCCATGTAGAATCTCCTCGTTGCAAAGAGAAGCTGCTTATCGAACTTAAATCAAATCTCTTAGCTGCAGTAGAAGAAATCAATGTACATGCCCAAAGATATGAAGTTCTGGGCTATGATAATGAGATTGACGCTTGGTTCAGCAAAGCAGTTGGCCGGCCTTGTTATTTATTAAGATCTAGTTCCAGCAGCTGTATCCGCTTGAACAGGAACAAAAATACGGGCACATGCAGAGACGTGGATACCAGATTAAACTTCGTTAATGAAGCACAGATTTTACTCGTATCTGAGGAAAGCGTATCTGACCTCAATCATAGATTGAACTCAGTTAAAACCGAAGGACCTATTGGATTACCTACGGAAGTAGATGCAATGAGATTCCGGCCAAACCTTGTCATATCTGGTGGTGTTCCGTATGCTGAAGACAACTGGAGTGATCTTAAGATTGGAAGCAATCACTTCATGTCATTAGGCGGTTGCAACCGTTGCCAGATGATCAATATGAGTTATCAAGCTGGTGAGGCACAAAGATCAAATCAACCTCTAGCTACTTTAGCGGCATACAGGAGGGAAAAGTATTTGAATTTAATGTCGGGACAGGGGAAAATACTTTTCGGAATATTATTGAGATATGAGTGTGAAAACGAGGTTAAGGAAGAAACCTCCTCATGGCTTCAAGTGGGGCAAGAAGTACACCCTAACGCAGGATGA 2463 40.76 METAKEQFLKEYGESYSYDHKNIDDIRANEFKRLDGSVYLDHGGATLYSELQMDAIFKDLTSNVYGNPHSQSSSSLATSDIVEDARLQVLNICNASPKEYKCIFTSGATAALKLVGEAFPWSSQSTFMYTIENHNSVLGIREYALDKGAGALAIDFVEDTESSIKVLQHPLKKRSDVRTLEKEPTDHAYNLFAFPSECNFSGARFNLDLIDMIKEDSEQLLEGSELSRGCWLVLLDAAKGCSTDPPDLSKHKPDFVAISFYKLFGYPTGLGALIVRNEAAKLLKKTYFSGGTVAASIADIDYVKRREGIEESFEDGTLSFINIASIRHGFEILDTLTTISISRHTSSLARYTRNMLLALRHADGKEVCKIYGMEYIKAVYSGLGPVVSFNLKRPDGSWVGHREVENLASLSGIQLRTGCFCNPGACSKYLGLSHSDLLSNIEAGHVCWDDYDILNGKPTGAIRVSFGYMSTFEDAWKFMNFIVSSFVLLPSTSRHLSRIRSSSIQSAPEGADCRTPTKHHLTSIVVYPIKSCAGFRVDSWPLSSTGLLYDREWLLKSMNGEILTQKKVPEMYFIGTKIDLKTGILHVESPRCKEKLLIELKSNLLAAVEEINVHAQRYEVLGYDNEIDAWFSKAVGRPCYLLRSSSSSCIRLNRNKNTGTCRDVDTRLNFVNEAQILLVSEESVSDLNHRLNSVKTEGPIGLPTEVDAMRFRPNLVISGGVPYAEDNWSDLKIGSNHFMSLGGCNRCQMINMSYQAGEAQRSNQPLATLAAYRREKYLNLMSGQGKILFGILLRYECENEVKEETSSWLQVGQEVHPNAG 820
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g01013 820 Hamap Molybdenum cofactor sulfurase [MOCOS]. 15 817 IPR028886 GO:0006777(InterPro)|GO:0008265(InterPro)
Chna2g01013 820 ProSiteProfiles MOSC domain profile. 647 818 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Chna2g01013 820 Pfam MOSC domain 665 815 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Chna2g01013 820 SUPERFAMILY PLP-dependent transferases 28 483 IPR015424 -
Chna2g01013 820 SUPERFAMILY MOSC N-terminal domain-like 521 652 - -
Chna2g01013 820 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 3 487 - -
Chna2g01013 820 Gene3D - 54 335 IPR015421 -
Chna2g01013 820 Pfam Aminotransferase class-V 232 475 IPR000192 -
Chna2g01013 820 Pfam Aminotransferase class-V 38 175 IPR000192 -
Chna2g01013 820 SUPERFAMILY PK beta-barrel domain-like 664 759 IPR011037 -
Chna2g01013 820 Pfam MOSC N-terminal beta barrel domain 521 638 IPR005303 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g01013 K15631 molybdenum cofactor sulfurtransferase [EC:2.8.1.9]