AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g01041 ATGGCTCACAAGAGAACCACCGCCACCGTACACGGCGGCGACAGCTTACTAGAAAAGCTACCGGAAAGCATCCTTATTAATGAAATATTATTATTAAAACTAGAACCAGAAACACTAACCACACTTTGTTCCTTAGCTTGTGTTTCAACAAACCTTAAATCATCCGTACATAAAACTCTCTCTTCTTTCTCCTCACTCGATCTCTCCACGTTTTCACCCGATTCACAAACATTTGATGGAATAACAAAAAGGTTCCGGAACATCAAGAAGATCACCTTGGATTGCCTCCGTCTTAATGATTCCACTGTAGGAAGTATTCTTGGTCCACATGTTGAAGAATTGATTTTGTTGAAATGTTATTCACTCTCTTTTAAACTTTTTACTCGCATTGGGGAAACTTGTCCAAATTTAAGGGTGCTGACCCTTGAGATTTCTGGCTTCATTGAGAAGTCTGCACAACTAATGGTATACACAGGCTGCAAGCACCTTTCTATTCATAATGCTGCCAATAAAGTTCCCATTTCTTTCTCTAGACAGGCTTTGCACAATATTACTCAACTTGTCTTGACATCCCTTAGAGTTAAAGTTCGTGGAGGAGAAATCAATAATCACAGCCTAATGTTGGGTCGTATCTGCATCTTGATGCCCCAAACGGTCAGGGTCCTCAAGCTTGAGCCGGCTACTGGATCAGATATTTCGGCCTTTATAAGAGTGTTAACTATGAGGGCTCCTATCACTCCTGCGGATGCTGCACAAACGTTGACACACATATCACTAGTTATAGATAAAATTACTGATGATGTTATTCAAACTATTGCACGTTGTCTTCCTTTACTGACTGAGTTGGATCTTAAAGACAGGCCAGAATATGAACCGTATGATGACCTATCTGACTTCGGGGTTCAGTCATTAGTTGGCTTTAAGTATCTGACAAGCCTATCCCTTATACGCAGTCGACAACGTATTCTTACTTCATTCAAAATGGTGACTGATATGGGCATGTTTTTGCTATCAGAGGGTTGCAAAGGATTAGAATCAGTTAGACTTGGTGGGTTTTCTAAAGTGACTGATGCTGGCTTCACATCAATCTTCAATGCATGTTTGAAATTGAAGAAATTTGAGATTCAAAATGCTTCCCTTTTAACAGACTTGACATTCCAAGATGTCAGTAAGGTTCCTAGGTCTCTTGTAGAGGTTAAGTTGGTGTCGTGTAGTTCTATTACCAGCGAGGCTGTGAGTGAATTGGCGACATGCAGTTTGTTAGAGGTTCTTGATTTGCTTGGTTGCAGAAGTGTAGCAGATTCTTGTCTTAACAATGTTTCCCGCCTTGATTTGTTGACAAGTTTAAACTTAGGGGGTGCGGATGTTACTGATGTTGGTATGAAGGTTTTAGGTACAGGGAATGCGCCTATTGCTTGCTTATCTTTAAGAGGCTGCAAGAGGGTAACCGATAAAGGGATCATGTTTGTGTTACGAAGTGAAGGAAAAATCACCAAAAATTTGTCATCTCTTGATCTCGGTCACATGCCTGGAATTACAGATAATGCTATTGCCACCATTGCTGATGTTTGTGCAGGGCTTACAGAACTGTGCATCAGAAACTGTTTTCATGTTACAGATGCATCCGTGAAGACTTTAGCTTTTATGGGAAGGTTACGGAGGCTCGATCTGAATAATTGTACTGCATTATCCGCTAGATCTTCTGAATATCTGAAGAAGCCTTTGTTTCGTGGCTTACAATGGATTGGAATTGGAGGGACCCGAATGTTTTCTGGAGATGTTGGGTTAGCTGAAATTTACAATGAAAAACGCTGGTTGTTTATCTGTGCTGATGGTTGTGAGGTGGGATGTCACGATGGATGGCAATATCATAAAACTTGA 1881 40.78 MAHKRTTATVHGGDSLLEKLPESILINEILLLKLEPETLTTLCSLACVSTNLKSSVHKTLSSFSSLDLSTFSPDSQTFDGITKRFRNIKKITLDCLRLNDSTVGSILGPHVEELILLKCYSLSFKLFTRIGETCPNLRVLTLEISGFIEKSAQLMVYTGCKHLSIHNAANKVPISFSRQALHNITQLVLTSLRVKVRGGEINNHSLMLGRICILMPQTVRVLKLEPATGSDISAFIRVLTMRAPITPADAAQTLTHISLVIDKITDDVIQTIARCLPLLTELDLKDRPEYEPYDDLSDFGVQSLVGFKYLTSLSLIRSRQRILTSFKMVTDMGMFLLSEGCKGLESVRLGGFSKVTDAGFTSIFNACLKLKKFEIQNASLLTDLTFQDVSKVPRSLVEVKLVSCSSITSEAVSELATCSLLEVLDLLGCRSVADSCLNNVSRLDLLTSLNLGGADVTDVGMKVLGTGNAPIACLSLRGCKRVTDKGIMFVLRSEGKITKNLSSLDLGHMPGITDNAIATIADVCAGLTELCIRNCFHVTDASVKTLAFMGRLRRLDLNNCTALSARSSEYLKKPLFRGLQWIGIGGTRMFSGDVGLAEIYNEKRWLFICADGCEVGCHDGWQYHKT 626
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g01041 626 Gene3D Ribonuclease Inhibitor 494 575 IPR032675 -
Chna2g01041 626 SMART LRR-CC-2 524 549 IPR006553 -
Chna2g01041 626 SMART LRR-CC-2 367 392 IPR006553 -
Chna2g01041 626 SMART LRR-CC-2 341 366 IPR006553 -
Chna2g01041 626 SMART LRR-CC-2 468 493 IPR006553 -
Chna2g01041 626 SMART LRR-CC-2 393 418 IPR006553 -
Chna2g01041 626 SMART LRR-CC-2 443 467 IPR006553 -
Chna2g01041 626 SMART LRR-CC-2 498 523 IPR006553 -
Chna2g01041 626 SUPERFAMILY RNI-like 55 317 - -
Chna2g01041 626 SUPERFAMILY RNI-like 328 588 - -
Chna2g01041 626 PANTHER UNCHARACTERIZED 44 441 - GO:0019005(PANTHER)|GO:0031146(PANTHER)
Chna2g01041 626 Gene3D Ribonuclease Inhibitor 53 493 IPR032675 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g01041 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:82853787 Chna9g02791 Chna-Chr9:147076144 dispersed
Chna Chna-Chr2:82546235 Chna2g01041 Chna-Chr2:82853787 tandem