AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g01133 ATGTCGATTTTCGCGGGAAAATTGGTTCATGTCGCCACACTCAAGTTTCATTCACGACTCTTAACAAACCACTGTAAGCCAACGAGGATTATAGTTAGATGTTGTTCGAATTCGCGCGAAAAATCGGAGGATTTTCCAGTTAGGTATATTCCGAAGCGAGCTTTGAAATTAAAAAATGATCCTGTTGTGGCTCCAAAGGAAGACAAGCTCCAAGTGAATGATGATTTGTCGAATGATAAGGGGAAGTCTAGGATTGGATTGTTTTCGGACGATAAAAGAGTCAAATTATTTTATTACTGGTACATGCTAACTGAAGTAGATTTGGTGTATTTATTGACAGGTAATCCGAGACCAATAGAAAAAAATATCCGTAAGAAAAATGTGAGAGCTGAGATGGGAGAACGTGAGTATGAATGGAGATCTGCGGAGTCGAAGGATTCTGTTGTGGCTCCAAAGTATTATGAGAATCACAAAATGAGTCGATTCACAAATGATGATTTGTCGAATGTTGAGGTTTTAGATGACAGGGAGAAGTCTAGAATTGGATTGTTTTTGGACGAAAAGTTACGGGAGGATGTTTATAAGGGAGATAATTTAAGATCGAAAGAAAAGAATATTCGTAATTTAGATGCGAGAGCGGTGGAGTTAGGAGAACGTGATAATGAATGGAGATATGCGGAGTCAAAGGTTATGGAAGAAGTTCATGGATTTGATGAATTAGAAGGTCCTGAAGAGGCTTTAGAATTAGATGAACTTGACTCTCATAACGGAAAATATGAAATCAAGCATCTCACGGTCGAACCTGGTAAAACCAAAGAAGAAGCTGAGAAGATAGCGATTGGATTGCTTGCTGCAAGAGCATATACAGCACTTGAGCTGAAGAAGAAACTGCTAGGAAAGAAGTTCTCCAATGATGTTGCCAATGCTGTGATTTCAGACTTCCAGAACAGAGGGTTTATTAATGATTACTTGTATGCGGAATCGTTTTCTCGATCGAGATGGTCTTCATCAAGTTGGGGTCCACGTAGAATTAAACAAGCCTTGTCCAAAAAGGGTGTCAATGATTCCGATGCACAAAAAGCAATAAAATCGGTTTTAGAGGATGGTGAATCTGGCGATGATCAGATTTCAAGGCTTGGATTGTCAAAGGCCTCAATGGACCATCTAGTTGCCCAAGCTTCAAAGCAGTGGCTTCGTTCTAAAGATCTGCCCAGTGAAAAACAAAAGTCAAGAATCATCACATGGCTTCAATATCGTGGCTTTAATTGGGGCGTTATCAGCTTCATCTTGAAAAAGTTACAATCAGAACATCCTCCTTAG 1320 39.62 MSIFAGKLVHVATLKFHSRLLTNHCKPTRIIVRCCSNSREKSEDFPVRYIPKRALKLKNDPVVAPKEDKLQVNDDLSNDKGKSRIGLFSDDKRVKLFYYWYMLTEVDLVYLLTGNPRPIEKNIRKKNVRAEMGEREYEWRSAESKDSVVAPKYYENHKMSRFTNDDLSNVEVLDDREKSRIGLFLDEKLREDVYKGDNLRSKEKNIRNLDARAVELGERDNEWRYAESKVMEEVHGFDELEGPEEALELDELDSHNGKYEIKHLTVEPGKTKEEAEKIAIGLLAARAYTALELKKKLLGKKFSNDVANAVISDFQNRGFINDYLYAESFSRSRWSSSSWGPRRIKQALSKKGVNDSDAQKAIKSVLEDGESGDDQISRLGLSKASMDHLVAQASKQWLRSKDLPSEKQKSRIITWLQYRGFNWGVISFILKKLQSEHPP 439
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g01133 439 Gene3D - 321 364 IPR036388 -
Chna2g01133 439 Gene3D - 275 319 IPR036388 -
Chna2g01133 439 Coils Coil 199 219 - -
Chna2g01133 439 Pfam RecX, second three-helix domain 321 361 IPR053924 -
Chna2g01133 439 Gene3D - 383 438 IPR036388 -
Chna2g01133 439 Pfam RecX, third three-helix domain 387 429 IPR053925 -
Chna2g01133 439 Hamap Regulatory protein RecX [recX]. 242 437 IPR003783 GO:0006282(InterPro)
Chna2g01133 439 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 21 438 IPR003783 GO:0006282(InterPro)
Chna2g01133 439 Pfam RecX, first three-helix domain 278 312 IPR053926 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g01133 K03565 regulatory protein