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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g01166 ATGAAGATTATGCAAGTAATCTTCATGATCGCCACTGTAATGGCCATAGCTATTGCTCTCACAGTCACGATCACCGGTGAAAGTCAGGAAACAACGCTCAATGTACCACCCGTTGTGAAAACGTCTCCTAAAAGGGTTAGTAGGTTTCTAGCAGAAACAAAAAACCCACGAGCAGCGGACCATTGCAATAAAGACAACGAGATATGTTACTACTTGGAAGGTAGAAACTCGACATGTTGTAACAACAAGTGTATGGATTTAACCGAGGATAAGCATAATTGTGGAGCGTGCAAGAACAAGTGTAAGTTTACGAGCTCGTGTTGCAGAGGAGAGTGTGTGAATTTGGCTTATGATAAGAGGCATTGTGGTTCGTGTGGTAACAAGTGTATGCCCGGTGGTTACTGCATTTACGGGCTTTGCAACTACGCGTAA 432 43.52 MKIMQVIFMIATVMAIAIALTVTITGESQETTLNVPPVVKTSPKRVSRFLAETKNPRAADHCNKDNEICYYLEGRNSTCCNNKCMDLTEDKHNCGACKNKCKFTSSCCRGECVNLAYDKRHCGSCGNKCMPGGYCIYGLCNYA 143
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g01166 143 PANTHER STIGMA-SPECIFIC STIG1-LIKE PROTEIN 3 4 143 IPR006969 -
Chna2g01166 143 Pfam Stigma-specific protein, Stig1 29 143 IPR006969 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g01166 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:94892390 Chna5g01379 Chna-Chr5:65866706 dispersed
Chna Chna-Chr2:94752918 Chna2g01166 Chna-Chr2:94892390 tandem