AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g01172 ATGTTGAGGATTAAAAGGGTACCTACTATTTTATCGAATTATCAAAAAGATGAAGGTGATGATTCTGGTGGGCCCCGTGGCTGCGGACGTAATTGTTTGAGAAAGTGTTGCCTACCAGGGTCTAAGCTACCTTTGTATGCTTTTCCGAAATTCGACAAGGTTGAATTGTGTGACAAAAATGAGTTTCCTTTTGCTTTCTTGGACTCGCTTCTCCTAGGAGAGTGGGAGGATCGAATGCAAAGGGGTCTTTTCCGATATGATGTTACCGCCTGTGAAACCAAGGTCATTCCTGGTGAACACGGTTTTATTGCTCAGCTGAACGAGGGACGTCACCTCAAGAAACGCCCCACTGAGTTTCAAGTCGATAAAGTGCTGCAACCATTCGATGAGAACAAGTTCAACTTTACTAAAGTTGGACAGGAAGAGGTGCTCTTCCAGTTTGAAGCAAGTGAAGATGGTGAAGTTCAGTTCCATCCAAGCGCTCCCATTGTTGCCGAGAATTCGCCTAGCGTTGTTGCCATTAATGTAAGTCCCATTGAATATGGGCATGTGCTTTTGATTCCTCGAATTCTTGAACGCTTACCTCAAAGAATTGATTACAAAAGCTTGTTGCTTGCACTGTACATGGCACATGAGGCTGGAAGTCCATACTTTCGTCTAGGCTACAATAGCTTGGGGGCATTTGCTACTATCAATCACCTTCACTTCCAGGCTTACTACTTGGCCGTGCCATTTCCAATCGAGAAAGCTGCGTCTAGAAAGATATCTGATATCAATGCTGGGGTCGAAGTTTCTGAGATTCTCAACTATCCTGTCAAAGGTCTCATCTTTGAGGGTGGAAATTCACTTGAAGATTTATCCAATGCAGTGGCTGATGCCTGCATATGCCTTCAAGATAACAACATACCTTACAATGTCCTCATTTCAGAATCTGGCAAACGCGTCTTTGTCGTTCCGCAGTGCTATGCAGAGAAGCAGGCTCTTGGGGAAGTGAGTTCTGAGGTTCTAGATACCCAAGTGAACCCTGCTGTTTGGGAAATCAGTGGACATATTGTGTTGAAAAGGAAAGAAGACTATGAAGGAGCGTCTGAGAAAAAAGCTTGGAGGCTTCTGGCAGAGGTTTCTTTGTCTGAAGAAAGGTTCCAGGAAGTGGTAGCCATTATATTTGAGGCCATTTCATGTGCTGTTATCGAGAGGATATCGTCTGAGGATGAGCAAGATGTTGATAAAGTTGGTGGTCGTAACAATGGTACCCGTGCAGCCATCATGCCAGGGAAGCATGAATGCCTAGTTAAACACTAG 1302 44.47 MLRIKRVPTILSNYQKDEGDDSGGPRGCGRNCLRKCCLPGSKLPLYAFPKFDKVELCDKNEFPFAFLDSLLLGEWEDRMQRGLFRYDVTACETKVIPGEHGFIAQLNEGRHLKKRPTEFQVDKVLQPFDENKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIVAENSPSVVAINVSPIEYGHVLLIPRILERLPQRIDYKSLLLALYMAHEAGSPYFRLGYNSLGAFATINHLHFQAYYLAVPFPIEKAASRKISDINAGVEVSEILNYPVKGLIFEGGNSLEDLSNAVADACICLQDNNIPYNVLISESGKRVFVVPQCYAEKQALGEVSSEVLDTQVNPAVWEISGHIVLKRKEDYEGASEKKAWRLLAEVSLSEERFQEVVAIIFEAISCAVIERISSEDEQDVDKVGGRNNGTRAAIMPGKHECLVKH 433
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g01172 433 PANTHER GDP-D-GLUCOSE PHOSPHORYLASE 1 3 394 IPR026506 GO:0005737(PANTHER)|GO:0006006(PANTHER)|GO:0080048(PANTHER)|GO:0080048(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g01172 K14190 GDP-L-galactose phosphorylase [EC:2.7.7.69]
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Event-related genes

Select Gene_1 Gene_2 Event_name
58702 Chna2g01172 Chna6g03894
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:95423611 Chna6g03865 Chna-Chr6:330343025 dispersed
Chna Chna-Chr2:95423611 Chna6g03894 Chna-Chr6:332064054 wgd