AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna2g01195 ATGAAGACTAAGAGCAATCAGGTAACCAAGAGCAAGCCAGAAATACAAACCCAAGCTTCACAGGAGTCCCCAAGTGACCAACATAACGATGCTACAGAGGCTCCTGTTCCTGACACTGGTTCAGCCTCCATTTCGAGCAATGACAACAGAAAAGTTTCTCGAGAGGATATTGAACTTGTCCAGAACTTGATAGAACGCTGTTTGCAGCTGTATATGAACAAAGACGAGGTTGTGAAAACTTTACTAAATCGTGCAAGGATAGATCCTGGATTTACAGCTTTAGTATGGCAGAAATTGGAAGAAGAGAATGCAGACTTTTTTAGAGCCTACTATATAAGGCTGAAACTGAAGAAGCAGATCATCCTGTTTAATCATTTGCTTGAACATCAGTACCATCTTACCAAGCATCCAGTGCATCCAAGGCTTCCTCTTGCTCCTATACAAAATGGCATCCATCCCATGCCAGTTAACAACTTACCAATGGGGTACCCTGTTCTACCACAACCTTCAATGGCAACTACTGGCCAACCTCATATGAATGCCATTGGTATGTCCAATTGTCATGTAGTCAATGGAGTGCCTGCTTCAAGTAACTTCCATCCAATGCGGATGAACTCTGGAAATGGAAGTATGGGGATGGATAGTAGTGCAGCTGATGCCACACCAGCTATTCCAGGGAATGGGGCAATATCACCCATGTCAGATATGCCTATGAGCCCTACATCAGCATCCAGTGGCCATTTCCCGTTTACTACATCCGAAATATCGGGAATGGGGGTAGACACATCAGCTCTTGATACAGCTTTTACATCTGACGTGGCAAGTTCTGTAGACTTGCATCTGCAACCTGATAATGGAACTTCTAGAGCTTTTGGTCATATCCCTTGGAATTTCAGCCTTTCAGATCTTACAGCAGATTTGTCAAATTTGGGAGATCTCGGAGCTCTTGGAAACTATCCTGGCTCCCCCTTTCTGCCATCTGATTCAGATATATTACTTGATTCCCCGGAACAAGAGGACATTGGTAAGAACACTATACCCCCAGTTCTATGTTTAGTTAGCTTCATACTTCCAGATAAAAAAGGTGTGCTAATTAAAACCCCTTTTGCTTTATGGCATTAG 1122 43.32 MKTKSNQVTKSKPEIQTQASQESPSDQHNDATEAPVPDTGSASISSNDNRKVSREDIELVQNLIERCLQLYMNKDEVVKTLLNRARIDPGFTALVWQKLEEENADFFRAYYIRLKLKKQIILFNHLLEHQYHLTKHPVHPRLPLAPIQNGIHPMPVNNLPMGYPVLPQPSMATTGQPHMNAIGMSNCHVVNGVPASSNFHPMRMNSGNGSMGMDSSAADATPAIPGNGAISPMSDMPMSPTSASSGHFPFTTSEISGMGVDTSALDTAFTSDVASSVDLHLQPDNGTSRAFGHIPWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSDILLDSPEQEDIGKNTIPPVLCLVSFILPDKKGVLIKTPFALWH 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna2g01195 373 NCBIfam TIGR01589 domain 57 113 IPR006476 -
Chna2g01195 373 PANTHER OS02G0137100 PROTEIN 54 327 IPR006476 -
Chna2g01195 373 MobiDBLite consensus disorder prediction 1 51 - -
Chna2g01195 373 MobiDBLite consensus disorder prediction 1 48 - -
Chna2g01195 373 Pfam Plant protein 1589 of unknown function (A-thal-3526) 60 111 IPR006476 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna2g01195 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
58716 Chna2g01195 Chna6g03967
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr2:97274476 Chna2g03194 Chna-Chr2:344784913 dispersed
Chna Chna-Chr7:175935187 Chna2g01195 Chna-Chr2:97274476 transposed
Chna Chna-Chr2:97274476 Chna6g03967 Chna-Chr6:334992489 wgd