AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna6g01803 ATGGGAACAGAAGTACACTGCAAAAGCTCTTTTGAAGGGTATTACTCCATGAGGGATGTTAATGAGGATTCCAATAGTAGTAGCTGGCCTCTTTTTTATGGAGAAAACAAAGCTTTGACTAATGGTCATTATTACAACGGCTTCGTACCAAGGACCGTTGCAGATGCGTATCCTGGATGTGACAAGGAGGCAATAAAGCAAAAAATGCTTGAACATGAAGCCATCTTCAAGAACCAGGTTTTCGAGCTTCATCGTCTCTACAGAAGACAAAGAGACATGATGGAAGAAGTCAAAAGAAAGGAATACCATAAGCATCAGATGTCAATTGATGCATCATCATCATCAAGCTTCTTACCATCACAAAGGCCTTACGAAGATGGTCACAAATGGCAAATACCGAGCTTCCCATTGACCCACTCAAATTCCGCAAGGCCGTCCATTTTTGGAGCAGAGATAAATAATTCTCCTTTAAGTTGCTCAAAAGAGAATAATAGTATAAAGGATTCCGAGGGTGTAGAGGGTAGACCTTCAAAAGTTAGAAAGAAGTTATTTGATCTTGAACTTCCGCCTGATGACAACGTTGACCATGACGAACATGAGGAAATGCAATATAAACAGCCGTCCGAAGAATCAAGTTATAAAGATACTTCATCGGGTCAATTTGTTAAGGGGTCTAATGGACTGGCTGATCTTAATGAGCCTGTCCATGTTGAAGAAGCAGTGGCTCATGCATCAGTTAAACCAAGAGGGCCACAATTTATTACTCCAAGTGGTGAGTTCTTTGATAAGGCTCAAAGTGGTCGAGCTAATGGTCCATTTAATCCTTCAGGGTCACAATTCATCAGCCCAACTGGTGAGTACTTTGAGAAGGCTCAAAATGGTCGGGCTAATGGTGCATTTAATCCTTCAGGGTCACAATTCATTAGCCCAACTGGTGAGTACTTTGAGAAGGCTCAAAACGGTCGGGCGAATGGTGCAATTAATCATTCATTGCTCGAGGGAAAAAGCAATGGAAGAGATTGGTTGTCCAATATGCGTGAAACAGGCAATAGTAGAAGCAATATGAACTTCACACCAGGAACTTATACCGATCATTCCCGCTTTAATCAAACTTCTTTACCCTTCCCTCCTTCGCGTACAAATGCTTCATACCCGTACATGAATGCTACAGATTTGGCAAATTCTTGGGGAAAGCCAAACGGTAGTTTCACAAATAAGTTAAATTCGTTTCAGAAGCAACCGTCTTTTCTATCATCTCCAAAAAGCCACGGGGTTTATGGAGACAAGTGGCGTATGAATGGATGTTATACACCAAATGGATTTCATCATGGGTCATCATCCGGATCAAAAGATGTATATACCCGTTTGCCTTCTGATGGTTATGATCAAAGAAACCGCAATAATCTTGAGGATAAGTCGCACAGTTTCTTTAAAGGTTCAAACTTTATCGATTTGACTGGTAGTAATAAAGGCATTGACTTGAATAAAGATAGCAATACTGAAAGAAAATGTGATAAAACAGTACCCCCATGGCTTCAAAATAAACCGGTTATCTGTAATAAAGATTCCCGTGTTGACAATCGCGTGGAAAATAATGGAAAGATTCTCGGGAATTCTTGTGTTTCGAAAAACGAGTCTTCGTCACTTGTGTCTACCTCAGCATCACTTTGTTGCCCTGATAATGGGAAAATAAAAATGGAAACGGAAAATAGAGGATTTGATATGAATGTTGCATGGGATGATCCTGAAAGCAAACAGATTGAGATGGAAGGGGGTAATCTCGAAAAAGAAACAGATAAAATCAAGAACCATTTTGACTTGAATTCATGCTTGACTGAAGACGATGATTTGATGGCACGTGAGTCTGTTAAAAGCTCAAGTGAGAGAAGGAAGACGATAACAATGGATATAGATTTAGAAGCCCCTGCTGTTCCCGAGGCTGAGGAAGAAGAAACAATTAACGAGGTCAAGAAAATTGATGATTGTGATTATGAGTCGATAGAAAAAATGGCATCTGAAGCAATAGTCGCGATGATTGGCATATCTAATCAGCAAGATCAAGCGGGATCCACGTCTGAGGTGGCGGTTTGTTCTGATGACAATGACAATGACAAAGGCCGTCTTTTATTGTTACTTGAGGCAGTTGAAAACGCGGGGTCCGCATCTAACGAGTTGGATGAGTACGAAGAGTTGACTTTGCAACTAGAAGAGACTAAAGAAGAAGATTACATGCCAAAGCCTTTAGCTACCGATTTTCCGGAGCCCGTAGAAGCGGGCCCGACACGACCTCGAAGAGGTCAAGCGAGGCGAGGTAGGCCCAGGAGGGATTTCCAAAGGGACATCCTTCCCGGGCTCGTTTCTTTATCAAGGCATGAGGTGACCGAAGATTTACAGACATTTGGTGGGTTAATGAAAGCGACCGGGCATTCTTGGAATGTAGGATTGACGAGAAGGAACGGGACCCGGGGAAGGCGGAAGTCTGTGGCCGTGGCTGTCGAGCCACCTCCCGCCGCCACCCCACCACCACCTCCTCCTCCGCCACCACCTCCACCACCACCACCTTTGTCGGAGCAGCTTAATAACATGGAAGCGGTAGGACTAGATGAAAGAAGCTTAACGGGGTGGGGTAAGACGACAAGACGTCCTCGGAGACAACGTTGTGCTGCGGGTACTTCTGTGGCCGCGGTCCCGTTAACGTAA 2700 43.56 MGTEVHCKSSFEGYYSMRDVNEDSNSSSWPLFYGENKALTNGHYYNGFVPRTVADAYPGCDKEAIKQKMLEHEAIFKNQVFELHRLYRRQRDMMEEVKRKEYHKHQMSIDASSSSSFLPSQRPYEDGHKWQIPSFPLTHSNSARPSIFGAEINNSPLSCSKENNSIKDSEGVEGRPSKVRKKLFDLELPPDDNVDHDEHEEMQYKQPSEESSYKDTSSGQFVKGSNGLADLNEPVHVEEAVAHASVKPRGPQFITPSGEFFDKAQSGRANGPFNPSGSQFISPTGEYFEKAQNGRANGAFNPSGSQFISPTGEYFEKAQNGRANGAINHSLLEGKSNGRDWLSNMRETGNSRSNMNFTPGTYTDHSRFNQTSLPFPPSRTNASYPYMNATDLANSWGKPNGSFTNKLNSFQKQPSFLSSPKSHGVYGDKWRMNGCYTPNGFHHGSSSGSKDVYTRLPSDGYDQRNRNNLEDKSHSFFKGSNFIDLTGSNKGIDLNKDSNTERKCDKTVPPWLQNKPVICNKDSRVDNRVENNGKILGNSCVSKNESSSLVSTSASLCCPDNGKIKMETENRGFDMNVAWDDPESKQIEMEGGNLEKETDKIKNHFDLNSCLTEDDDLMARESVKSSSERRKTITMDIDLEAPAVPEAEEEETINEVKKIDDCDYESIEKMASEAIVAMIGISNQQDQAGSTSEVAVCSDDNDNDKGRLLLLLEAVENAGSASNELDEYEELTLQLEETKEEDYMPKPLATDFPEPVEAGPTRPRRGQARRGRPRRDFQRDILPGLVSLSRHEVTEDLQTFGGLMKATGHSWNVGLTRRNGTRGRRKSVAVAVEPPPAATPPPPPPPPPPPPPPPLSEQLNNMEAVGLDERSLTGWGKTTRRPRRQRCAAGTSVAAVPLT 899
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna6g01803 899 MobiDBLite consensus disorder prediction 834 857 - -
Chna6g01803 899 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 17 887 - -
Chna6g01803 899 MobiDBLite consensus disorder prediction 166 208 - -
Chna6g01803 899 MobiDBLite consensus disorder prediction 153 219 - -
Chna6g01803 899 MobiDBLite consensus disorder prediction 105 124 - -
Chna6g01803 899 MobiDBLite consensus disorder prediction 814 899 - -
Chna6g01803 899 MobiDBLite consensus disorder prediction 745 774 - -
Chna6g01803 899 Coils Coil 711 741 - -
Chna6g01803 899 Pfam Plant protein of unknown function (DUF863) 143 215 IPR008581 -
Chna6g01803 899 Pfam Plant protein of unknown function (DUF863) 389 523 IPR008581 -
Chna6g01803 899 Pfam Plant protein of unknown function (DUF863) 531 887 IPR008581 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna6g01803 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
60026 Chna6g01803 Chna8g01381
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr6:112034874 Chna9g01652 Chna-Chr9:66537668 dispersed
Chna Chna-Chr6:112034874 Chna8g01381 Chna-Chr8:125350376 wgd