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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna6g01804 ATGTGTCGTTTGGGAGTCCGTCGGATGTATCTGTACAACGAGATACGAGGGTGGAAGCAGGGTGGCTTTTTAGAGGAGGAGTATGCATTGAATTTGGAGGAGTATGATATTGCAAAGCAATTGAGAAACAAGCTCAATGAGGTTGAAGCTGAAGTTAGTAAGCAGCTTGAATCAAAAAGGGGATTATCTTCAAAAAGTGAAGCTCAAGACAAGGGTATAAGCTTGTTGCGGTTGCGAGCAGACCTGCAAAATGCAATCGAGAATGAAAACTATGCACTGGCAGCTGAAATACGTGATCAAATGTCCAAGCTGGAGGCTGATTCACTGGCTGCATCAATAAAAGCCCAAACCTTTGAACAAGCTCAATTTGAGTTCCGTTTAGGCCAGAAAGTGAGGCACAAAAAGTTTGGATACAGAGGGGTAGTTTGTGGAATGGATCCAGTGTGCTGTGAAACAAGCTCGTGGATGGAAAATGCAAATGTTAACCAGTTGACTCGTGGTCCTGATCAGCCATATTATCAGATTTTAGTTGATGTACATGAAGACCCTAATCTATTGGTTGCATATGTTCCAGAAGAAAGTTTACTGGCTCCAGAAGAACCGGATAAAGCTAGGTTTGATCACCCATACACGCCCTTCTTATTCTTAGGTATGGATTCAGCTGGAGACTTTATTCCTGTGAAACAGTTACGTGAGAAGTACAATAGGCCTAGACACGAGGTGCCATATGATCCAAAAGATGACAAGACCGGAAATGATGCGTAA 765 42.88 MCRLGVRRMYLYNEIRGWKQGGFLEEEYALNLEEYDIAKQLRNKLNEVEAEVSKQLESKRGLSSKSEAQDKGISLLRLRADLQNAIENENYALAAEIRDQMSKLEADSLAASIKAQTFEQAQFEFRLGQKVRHKKFGYRGVVCGMDPVCCETSSWMENANVNQLTRGPDQPYYQILVDVHEDPNLLVAYVPEESLLAPEEPDKARFDHPYTPFLFLGMDSAGDFIPVKQLREKYNRPRHEVPYDPKDDKTGNDA 254
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna6g01804 254 Pfam Hemimethylated DNA-binding protein YccV like 124 220 IPR011722 GO:0003677(InterPro)
Chna6g01804 254 PANTHER YCCV-LIKE DOMAIN-CONTAINING PROTEIN 27 248 IPR053189 -
Chna6g01804 254 SUPERFAMILY YccV-like 123 219 IPR036623 GO:0003677(InterPro)
Chna6g01804 254 Coils Coil 31 58 - -
Chna6g01804 254 Pfam UvrB-uvrC motif 77 106 IPR001943 GO:0005515(InterPro)
Chna6g01804 254 Gene3D - 120 222 IPR036623 GO:0003677(InterPro)
Chna6g01804 254 NCBIfam heat shock protein HspQ 123 224 IPR011722 GO:0003677(InterPro)
Chna6g01804 254 SMART YccV-like-2-a 122 226 IPR011722 GO:0003677(InterPro)
Chna6g01804 254 MobiDBLite consensus disorder prediction 230 254 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna6g01804 - -