Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chna6g01844	ATGGATTACTCTCCGGCGACTCGCCGGACGACACCAGACCTCTACTCAACCTTCGTAGTTCACAGCGATGAAGAAGACAATCAAAACGACGACGAATCACTCCCTCCACTTCTCAAACGGTTACCTAAAGACTTCGGCGCTGCCGTTGATTCCGATGACGACGAAAGCATCTCCGGTACAATGATCGTGAAGCGCGTGGAGCCCACGCGTCATCCCACGCGCCGTGGGAGGGATGATGAGTCCGATGACGAAGGAAATGAGAGCATCTCCGGTACTATGATTGTGAAGACTAACCCTAGGCGCGTGGACTACACGCGCCGGAGAGATGACGAGGAGGACGATGAGGATGAGGATGAGGAAGGAGGTGGATTTGGTACGTTTGTGGTGAGATCGGATGAGAGAGAGGATGAGTCGGTATCGGGGACGTTTGTGCGGCGGAGTGTAGGTGGAGGAATGTCGACGATGAGTAGAGCGGTAGCGAGTATGCAGGGAGTAGGGGAGGGGTTTGGGAAAGGGAGGGGAAAAACGTCTTCGCAGGATGGTGACGGAGGGCATTCGAGGAAACGGACGAGTAAAATGTCGTCCGGTTCGATTGCGGATAGTATTACTAGAGAAGATCCGTCTACTAAGTATGAATTGCTCCATGAACTTGGAAAAGGTTCTTATGGGTCTGTCTACAAAGCTCGGGATTTAAAAACTTCGGAAATGGTCGCAATTAAAGTGATATCATTATCTGAAGGGGAAGAAGGGTATGAAGAAATTCGTGGTGAAATAGAGATGTTGCAGCAATGCAGTCATCCTAATGTTGTTCGTTATCTAGGAAGCTACCAGGGTGAGGAGTACCTCTGGATTGTAATGGAGTATTGTGGTGGAGGAAGTGTTGCTGATTTGATGAATGTTACAGATGAACCTCTAGAGGAGTATCAAATAGCATATATATGTAAGGAAGCATTGAAGGGCTTATCCTATTTGCACTCGATCTTCAAGGTGCATCGTGATATCAAGGGTGGTAATATCTTGTTGACTGAACAAGGAGAGGTGAAGTTGGGGGATTTTGGTGTTGCTGCACAGCTGACAAGGACGATGTCCAAACGTAATACGTTTATTGGTACTCCCCACTGGATGGCTCCTGAAGTTATCCAGGAGAGCCGATATGATGGGAAGGTGGATGTGTGGGCTCTTGGGGTGTCTGCAATCGAAATGGCAGAGGGCCTTCCTCCAAGATCAAATGTGCATCCAATGAGGGTGTTATTTATGATCTCCATCGAACCTGCTCCAATGCTTGAAGATAAAGAAAAATGGTCTCTTGTGTTCCATGATTTCATTGCAAAATGCCTTACAAAAGACCCTCGTATACGTCCCACTGCATCTGAGCTACTAAAGCATAAATTCATAGAAAAATGCAAAAGTGGAGCTTCTGCAATGGTGCCAAAGCTCGAGAAGGCAAAGATAAATAGGGCTGCAATGGCATTGGAAGCAGAACACGTTTCTGAGACCATACCAGGATATGGGACACTTGGACCGAAAGTGAATGAAGACTTTGGAGATACTGTCCCTTCTAAACCTCAACAAGTGCCCAATGGAGTACCTGCTGTAGGTGGTACAGTAAAAGCAGGTGGTTTGGAAGAGGCTGAAGAAGAACTGAATCTCTCTTACCGTCCATATTCTGGTACAAATGTTTATCCCATGTATAGCATAATCAGTGATTTCGGAAGTGTTATAATTCATGGTGGAGTGGATATACATAAGACAGCTGCTAAAACACCGCTTCCAGCAGCGAAGGACCCCTCACACTCTTCAGCACGTGGTCAAAGTTCATCAATGGCTGATCCTGGGGAAGATTCAGAGACTACTTTATTCTGGTTGACCAAAAAAGTTGGGGGATCTGCAGATACATTTCGTGCTGTTGAATCACCATCTACTGAATACACAGCACAAGCTATAGGAAGCAACGGCGCTGTCATAAGTGGCACAACCAAGAACGAAGGTGTTAATCGCAAAGCACTAGACAAGCTTTGGTCCATATATGCCGCTGGTAACACAGTGCCCATTCCGTTTTTGAGGGCAACTGATATCTCTCCCATTGCATTGTTGTCTGAGAATGTGCTTGGAAGTCAGCATCTAGATAATGTTGGCAACGTTGCTGTAGAAGCATTACAAGAGCTTTTCACAAGTGATGGGCAATCTAAAAAGAGTCGAAGACAAAACGAGCTGCCTCTTCCACCCAGTGTTTATCAGAGACTCACTTCAAGTCCAACATTAATGAATCTTGCGCAGGCTTTATCATATCATAAAATGTGCTACGAAGAGATGCCACTGCAAGAACTACAAGCGACGCAGGAACAACAAACCATTCAGAACCTCTGTGACACCCTTAGAACTATTTTGCGGTTATAA	2397	46.18	MDYSPATRRTTPDLYSTFVVHSDEEDNQNDDESLPPLLKRLPKDFGAAVDSDDDESISGTMIVKRVEPTRHPTRRGRDDESDDEGNESISGTMIVKTNPRRVDYTRRRDDEEDDEDEDEEGGGFGTFVVRSDEREDESVSGTFVRRSVGGGMSTMSRAVASMQGVGEGFGKGRGKTSSQDGDGGHSRKRTSKMSSGSIADSITREDPSTKYELLHELGKGSYGSVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLEEYQIAYICKEALKGLSYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSNVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFIAKCLTKDPRIRPTASELLKHKFIEKCKSGASAMVPKLEKAKINRAAMALEAEHVSETIPGYGTLGPKVNEDFGDTVPSKPQQVPNGVPAVGGTVKAGGLEEAEEELNLSYRPYSGTNVYPMYSIISDFGSVIIHGGVDIHKTAAKTPLPAAKDPSHSSARGQSSSMADPGEDSETTLFWLTKKVGGSADTFRAVESPSTEYTAQAIGSNGAVISGTTKNEGVNRKALDKLWSIYAAGNTVPIPFLRATDISPIALLSENVLGSQHLDNVGNVAVEALQELFTSDGQSKKSRRQNELPLPPSVYQRLTSSPTLMNLAQALSYHKMCYEEMPLQELQATQEQQTIQNLCDTLRTILRL	798

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chna6g01844	798	ProSitePatterns	Protein kinases ATP-binding region signature.	217	240	IPR017441	GO:0005524(InterPro)
	Chna6g01844	798	CDD	STKc-MAP4K3-like	210	465	-	-
	Chna6g01844	798	SUPERFAMILY	Protein kinase-like (PK-like)	210	466	IPR011009	-
	Chna6g01844	798	PANTHER	SERINE-THREONINE-PROTEIN KINASE TAO	186	498	IPR050285	GO:0006468(PANTHER)\|GO:0035556(PANTHER)\|GO:0043408(PANTHER)
	Chna6g01844	798	MobiDBLite	consensus disorder prediction	589	614	-	-
	Chna6g01844	798	MobiDBLite	consensus disorder prediction	598	613	-	-
	Chna6g01844	798	MobiDBLite	consensus disorder prediction	190	204	-	-
	Chna6g01844	798	Pfam	Protein kinase domain	211	465	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Chna6g01844	798	MobiDBLite	consensus disorder prediction	67	82	-	-
	Chna6g01844	798	FunFam	serine-threonine-protein kinase dst1 isoform X1	208	499	-	-
	Chna6g01844	798	Gene3D	Transferase(Phosphotransferase) domain 1	207	499	-	-
	Chna6g01844	798	ProSiteProfiles	Protein kinase domain profile.	211	465	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Chna6g01844	798	MobiDBLite	consensus disorder prediction	1	140	-	-
	Chna6g01844	798	MobiDBLite	consensus disorder prediction	726	745	-	-
	Chna6g01844	798	FunFam	Aurora kinase A	203	292	-	-
	Chna6g01844	798	MobiDBLite	consensus disorder prediction	165	205	-	-
	Chna6g01844	798	SMART	serkin-6	211	465	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chna6g01844	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	1603374	Chna	Chna6g01844	Chna-Chr6:114673995	Chna7g03250	Chna-Chr7:283933176
	1626504	Chna	Chna6g01844	Chna-Chr6:114673995	Chna9g01780	Chna-Chr9:75753518

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Chna5g04232	.	5	683	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G79640	51.878	0.0	686.0
	Chna6g01844	.	1	836	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G69220	57.486	0.0	870.0
	Chna8g02560	.	40	709	MAP Kinase Kinase Kinase Kinase Protein gene family	AT4G10730	62.432	0.0	882.0
	Chna6g03691	.	4	673	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G79640	55.895	0.0	711.0
	Chna8g00051	.	7	476	MAP Kinase Kinase Kinase Kinase Protein gene family	AT4G14480	50.386	1.90e-158	458.0
	Chna4g02165	ACH	7	673	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	63.081	0.0	867.0
	Chna9g01780	ACH	6	673	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	61.024	0.0	826.0
	Chna5g01878	.	198	371	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	57.386	1.77e-58	196.0
	Chna8g00942	ACH	6	384	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	79.843	0.0	660.0
	Chna7g03250	.	1	375	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	76.104	0.0	584.0
	Chna8g00943	ACH	415	647	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	36.842	3.33e-28	111.0
	Chna5g04305	.	5	683	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G79640	52.507	0.0	685.0
	Chna7g01043	.	137	192	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	87.5	6.30e-29	108.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Chna	Pkinase	2.7e-70	CL0016		PK	STE_STE20-Pl