AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna6g01846 | ATGCCAACATTAACAAAGCTGTATACGATGAAAGAAGCGTCAGAACATAATTCTGCTGGTGATTGTTGGGTTGTTATTGACGGCAAGGTGTATGATGTGTCATCGTATCTGGACGACCATCCAGGTGGAGATGATGTCCTCCTTCAGGCTACTGGGAAAGACGCTACAGAAGAATTTGAAGACGCAGGTCATAGCAAAACCGCTAGGGAACAAATGGAGACTTTTTGTGTCGGTGAGTTGGACCCATCAGACATCCCACAACTTGAGGTTGTCGCAGAGAAACAAAAGAATTACGTCCCTGAGAAGCTTGTTCAGTTGAGTAAGCAATACTGGGCTGTTCCTGTGGTAGCTGTTGGCATATCTTTGGTGGTCACCATCTTGTACTTGCGCAAGAAGTAG | 399 | 45.61 | MPTLTKLYTMKEASEHNSAGDCWVVIDGKVYDVSSYLDDHPGGDDVLLQATGKDATEEFEDAGHSKTAREQMETFCVGELDPSDIPQLEVVAEKQKNYVPEKLVQLSKQYWAVPVVAVGISLVVTILYLRKK | 132 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna6g01846 | 132 | Pfam | Cytochrome b5-like Heme-Steroid binding domain | 9 | 81 | IPR001199 | - | |
| Chna6g01846 | 132 | PANTHER | CYTOCHROME B5 | 4 | 128 | IPR050668 | GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
| Chna6g01846 | 132 | SMART | Cyt-b5-2 | 8 | 81 | IPR001199 | - | |
| Chna6g01846 | 132 | FunFam | Cytochrome b5 type B | 3 | 85 | - | - | |
| Chna6g01846 | 132 | Gene3D | - | 4 | 93 | IPR036400 | - | |
| Chna6g01846 | 132 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
| Chna6g01846 | 132 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
| Chna6g01846 | 132 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
| Chna6g01846 | 132 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
| Chna6g01846 | 132 | SUPERFAMILY | Cytochrome b5-like heme-steroid binding domain | 4 | 89 | IPR036400 | - | |
| Chna6g01846 | 132 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) | |
| Chna6g01846 | 132 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna6g01846 | K23490 | cytochrome b5 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1603376 | Chna | Chna6g01846 | Chna-Chr6:115103266 | Chna6g04640 | Chna-Chr6:366966535 | |
| 1626505 | Chna | Chna6g01846 | Chna-Chr6:115103266 | Chna4g03092 | Chna-Chr4:245674703 | |
| 1630927 | Chna | Chna6g01846 | Chna-Chr6:115103266 | Chna9g00028 | Chna-Chr9:851650 |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Chna9g03411 | . | 48 | 133 | NADPH P450 reductases gene family | AT5G53560 | 56.977 | 1.09e-29 | 105.0 | |
| Chna6g02656 | . | 65 | 273 | NADPH P450 reductases gene family | AT5G17770 | 27.928 | 1.74e-19 | 86.3 | |
| Chna4g02288 | . | 131 | 273 | NADPH P450 reductases gene family | AT5G17770 | 39.355 | 1.09e-34 | 120.0 | |
| Chna00006391g00031 | . | 158 | 200 | NADPH P450 reductases gene family | AT5G17770 | 83.721 | 2.33e-19 | 77.4 | |
| Chna00038197g00025 | . | 31 | 281 | NADPH P450 reductases gene family | AT5G17770 | 83.665 | 1.66e-161 | 448.0 | |
| Chna2g03192 | . | 31 | 281 | NADPH P450 reductases gene family | AT5G17770 | 78.906 | 1.64e-152 | 425.0 | |
| Chna6g01846 | . | 1 | 134 | NADPH P450 reductases gene family | AT1G26340 | 61.194 | 3.84e-57 | 172.0 | |
| Chna7g03851 | . | 158 | 200 | NADPH P450 reductases gene family | AT5G17770 | 83.721 | 1.84e-18 | 76.3 | |
| Chna4g02451 | . | 59 | 273 | NADPH P450 reductases gene family | AT5G17770 | 35.443 | 7.75e-39 | 141.0 | |
| Chna3g02619 | . | 118 | 196 | NADPH P450 reductases gene family | AT5G17770 | 75.309 | 4.23e-39 | 130.0 | |
| Chna00001914g00006 | . | 1 | 133 | NADPH P450 reductases gene family | AT5G53560 | 71.429 | 3.40e-70 | 205.0 | |
| Chna9g03642 | . | 2 | 120 | NADPH P450 reductases gene family | AT1G60660 | 47.059 | 8.11e-31 | 103.0 | |
| Chna7g04152 | . | 39 | 281 | NADPH P450 reductases gene family | AT5G17770 | 39.847 | 4.07e-64 | 202.0 | |
| Chna4g03093 | . | 1 | 128 | NADPH P450 reductases gene family | AT5G53560 | 57.364 | 7.85e-54 | 164.0 | |
| Chna5g01058 | . | 4 | 281 | NADPH P450 reductases gene family | AT5G17770 | 69.286 | 4.26e-140 | 394.0 | |
| Chna9g00028 | . | 2 | 133 | NADPH P450 reductases gene family | AT5G53560 | 66.667 | 2.17e-67 | 198.0 | |
| Chna4g01048 | . | 1 | 134 | NADPH P450 reductases gene family | AT5G48810 | 50.0 | 5.43e-47 | 147.0 | |
| Chna4g03092 | . | 1 | 132 | NADPH P450 reductases gene family | AT5G53560 | 58.333 | 7.47e-57 | 171.0 | |
| Chna2g03955 | . | 1 | 126 | NADPH P450 reductases gene family | AT5G53560 | 53.125 | 5.20e-44 | 139.0 | |
| Chna2g02063 | . | 158 | 200 | NADPH P450 reductases gene family | AT5G17770 | 83.721 | 4.21e-17 | 77.0 | |
| Chna2g02927 | . | 198 | 253 | NADPH P450 reductases gene family | AT5G17770 | 64.286 | 2.49e-24 | 91.3 | |
| Chna7g02116 | . | 38 | 273 | NADPH P450 reductases gene family | AT5G17770 | 35.798 | 3.24e-43 | 157.0 | |
| Chna3g01893 | . | 6 | 83 | NADPH P450 reductases gene family | AT1G26340 | 38.462 | 7.69e-17 | 68.6 | |
| Chna6g04640 | . | 1 | 130 | NADPH P450 reductases gene family | AT2G32720 | 46.212 | 3.00e-41 | 132.0 | |
| Chna6g02372 | . | 96 | 273 | NADPH P450 reductases gene family | AT5G17770 | 36.683 | 7.07e-34 | 127.0 | |
| Chna00000137g00001 | . | 48 | 133 | NADPH P450 reductases gene family | AT5G53560 | 56.977 | 1.09e-29 | 105.0 | |
| Chna5g04549 | . | 158 | 200 | NADPH P450 reductases gene family | AT5G17770 | 83.721 | 2.33e-19 | 77.4 | |
| Chna6g02894 | . | 41 | 196 | NADPH P450 reductases gene family | AT5G17770 | 77.848 | 3.34e-88 | 259.0 | |
| Chna00001743g00005 | . | 7 | 133 | NADPH P450 reductases gene family | AT2G32720 | 76.378 | 3.41e-74 | 215.0 |