Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna8g01031 | ATGGGTTCCGAAATAACCGAACCATTCCTAACAGACTCATCATCTCAAGCCAAACAACCAGACAATGATGATCTGGAATCCATACCAGAATGGAAAGATCAGATCACACTAAGAGGACTGATAGTCAGTGCTTTGTTAGGGACTTTGTTTTGTATAATAACTCATAAGCTGAATTTAACAGTGGGGATTATCCCTTCGTTAAATGTAGCGGCTGGTTTGTTGGGGTTCTTTTTTGTCAAGTCGTGGACTAGTGTTGTGGAGAGGTTTGGTGTTGTTGTTAAGCCGTTTACGAGGCAGGAGAATACTGTTATTCAGACTTGTGTTGTTGCTTGTTATGGCCTTGCTTTTAGTGGTGGATTTGGGTCATATTTGCTTTCAATGGATGAGAGAACATACAATTTGATTGGTGCGGACTACCCGGGTAACCGGGCTGAGGATGTTAAGAACCCGGGGCTATTGTGGATGATGGGTTTCATTTTTGTCGTCAGTTTTCTTGGCCTTTTTAGTCTTGTTCCACTTCGCAAGGTCATGGTAATGGATTATAAGCTTACATACCCTAGTGGAACTGCCACTGCAATGCTGATCAATAGTTTTCACACTACCACTGGTGCAGAGCTTGCAAGGAAACAAGTAAACTGTCTTGGAAAGTATTTGAGCATAAGTTTTGTCTGGAGTTGCTTTAAGTGGTTTTTCAGTGGTGTTGGGGATGCTTGTGGTTTTGACAATTTTCCGAGTTTTGGCTTGATTTTGTACAACAACACATTCTACTTTGACTTCAGTCCAACTTATGTCGGATGTGGTCTTATCTGCCCTCACATAGTCAACTGTTCGGTTCTTTTTGGAGCTATTGTATCATGGGGTTTTCTTTGGCCACTGATTACTACATATGCAGGAGATTGGTATCCAGCTGATCTTGGCAGCAATGACTTCAAAGGTCTCTATGGCTATAAGGTCTTTATATCCATTGCCCTTATTCTTGGAGATGGTCTTTACAATCTGGTTAAGATAATATTCATCTCCCTTAAGGCGTTGTTGAACAGCCGCACTAAGCAACAAAATCTTCCTGTAACACACGAGATTCTAGATGCGGAGACAACTCAACTACAACTCGAAGAAAAAAAACGAGACACCGTTTTCTTAAAAGACAATATACCAACATGGGTTGCAGCATCCGGATACATAGCCTTAGTAGGAATATCCATGGCTACAATGCCACTCATATTCCCACCGCTAAAATGGTACCTCGTCCTATGCTCATACATTATCGCACCTGCATTAGCTTTTTGCAACTCATACGGAACTGGTCTCACTGATTGGAGTCTAGCTTCAACATATGGCAAAATCGGTCTATTCATCATAGCATCATTAGTCGGAAGCGATGGTGGGGTCATAGCTGGTTTAGCTGCATGTGGGGTCATGATGTCAATTGTTTCAACCGCTGCTGATTTAATGCAAGATTTCAAAACTGGCTACCTTACATTATCGTCAGCAAAATCCATGTTTGTGAGTCAGTTAGTCGGAACAGCTATGGGATGCATCATTGCACCACTCACGTTTTGGATGTTTTGGAGCGCGTTCGAAATCGGGACTCCCGATAGTCCTTACAAGGCGCCGTATGCTGTCATATACCGTGAAATGGCTATCCTTGGTGTCGAGGGGTTCTCCGAGCTCCCCAAACATTGTTTGGCTTTATGTTGTGGGTTCTTTGTGGCAGCACTGGTCTTAAATCTTTTGCGAGATTTTACTCCCAAAAAGGTGTCTCAGTTCATACCTATTCCAATGGCAATGGCAGTTCCATTCTATATCGGGGCGTATTTTGCGATCGATATGTTTATTGGAACAGTGATACTCTTTGTGTGGGAGCGATTGAACAAGAAAGATGCTGAAGATTATGCAGGCGCAGTTGCTTCAGGCTTAATATGTGGTGATGGGATATGGACCATCCCATCAGCTATACTCTCGATTCTAAGGGTTGATCCACCAATCTGCATGTACTTTGGACCGTCTGTGAGTTCGTGA | 2019 | 42.84 | MGSEITEPFLTDSSSQAKQPDNDDLESIPEWKDQITLRGLIVSALLGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFFVKSWTSVVERFGVVVKPFTRQENTVIQTCVVACYGLAFSGGFGSYLLSMDERTYNLIGADYPGNRAEDVKNPGLLWMMGFIFVVSFLGLFSLVPLRKVMVMDYKLTYPSGTATAMLINSFHTTTGAELARKQVNCLGKYLSISFVWSCFKWFFSGVGDACGFDNFPSFGLILYNNTFYFDFSPTYVGCGLICPHIVNCSVLFGAIVSWGFLWPLITTYAGDWYPADLGSNDFKGLYGYKVFISIALILGDGLYNLVKIIFISLKALLNSRTKQQNLPVTHEILDAETTQLQLEEKKRDTVFLKDNIPTWVAASGYIALVGISMATMPLIFPPLKWYLVLCSYIIAPALAFCNSYGTGLTDWSLASTYGKIGLFIIASLVGSDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCIIAPLTFWMFWSAFEIGTPDSPYKAPYAVIYREMAILGVEGFSELPKHCLALCCGFFVAALVLNLLRDFTPKKVSQFIPIPMAMAVPFYIGAYFAIDMFIGTVILFVWERLNKKDAEDYAGAVASGLICGDGIWTIPSAILSILRVDPPICMYFGPSVSS | 672 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna8g01031 | 672 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Chna8g01031 | 672 | Pfam | OPT oligopeptide transporter protein | 34 | 653 | IPR004813 | GO:0035673(InterPro) | |
| Chna8g01031 | 672 | PANTHER | OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED | 15 | 668 | IPR045035 | GO:0016020(PANTHER)|GO:0035673(InterPro) | |
| Chna8g01031 | 672 | NCBIfam | OPT family oligopeptide transporter | 33 | 650 | IPR004813 | GO:0035673(InterPro) | |
| Chna8g01031 | 672 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna8g01031 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 59512 | Chna4g02603 | Chna8g01031 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr4:241134266 | Chna8g01031 | Chna-Chr8:100570074 | transposed | |
| Chna | Chna-Chr5:179557070 | Chna8g01031 | Chna-Chr8:100570074 | transposed | |
| Chna | Chna-Chr6:66833372 | Chna8g01031 | Chna-Chr8:100570074 | transposed | |
| Chna | Chna-Chr6:276312898 | Chna8g01031 | Chna-Chr8:100570074 | transposed | |
| Chna | Chna-Chr8:123972289 | Chna8g01031 | Chna-Chr8:100570074 | transposed | |
| Chna | Chna-Chr8:158549978 | Chna8g01031 | Chna-Chr8:100570074 | transposed | |
| Chna | Chna-Chr8:189428801 | Chna8g01031 | Chna-Chr8:100570074 | transposed | |
| Chna | Chna-Chr4:198609951 | Chna8g01031 | Chna-Chr8:100570074 | wgd |