AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna8g01059 ATGAACCCATATCAACCACCAAAATATCCTTCAGCCTCATCATCGTCTGATCAGGCTGGTAATTATTGGGGTACACACGCCGCGATGGGTACCCCTATGCCTGCGCCTAATCCTTACGTCCAATATGGCGCTCCTCAGGCCCCACCACCTCCTCCTCCTATGCCAAATAACATGGATAATGTACGTAAGAAACTTAACTCATGGGGTAATAAAGCCGAAACAACTGCATCTAATATTTGGACCAATTTGAAATCTGGTCAATCTGTGACTGGATCAGCATGGGGAAAAATGAATTTGACTGCAAAAGCGTTAACGGAAGGTGGGTTTGAATCATTGTACAAGCAGAACTTCACGACTTACCCAAACGAGAAGCTCAACAAGACTTTTGCATGTTATATGTCGACGTCTACTGGACCTGTTGCAGGAACGTTGTATTTGTCTAATATTCATGTTGCGTTTTGTAGCGATCGGCCTTTGGCTTTTAAACAACCCAACGGCATGGAGTCTTGGATCTACTACAAGGTTATAATCCCATTGGAGAAGATAGCCACAGTAAACCCTGTTACAATACCAGGTAAAAAACAAATAGACAAGTACATCCAACTCTCTACAATTGACGGTCAAGACTTCTGGTTCATGGGTTTCGTGAATCATGAGAAAGCATCAAAACATCTTCTCAATGGGGTGGCCACTTGTGTTAAAACCATTCCGGTTATTCCTTGA 723 43.15 MNPYQPPKYPSASSSSDQAGNYWGTHAAMGTPMPAPNPYVQYGAPQAPPPPPPMPNNMDNVRKKLNSWGNKAETTASNIWTNLKSGQSVTGSAWGKMNLTAKALTEGGFESLYKQNFTTYPNEKLNKTFACYMSTSTGPVAGTLYLSNIHVAFCSDRPLAFKQPNGMESWIYYKVIIPLEKIATVNPVTIPGKKQIDKYIQLSTIDGQDFWFMGFVNHEKASKHLLNGVATCVKTIPVIP 240
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna8g01059 240 Pfam GRAM domain 114 224 IPR004182 -
Chna8g01059 240 PANTHER GEM-LIKE PROTEIN 2 27 227 IPR037848 -
Chna8g01059 240 SMART gram2001c 111 189 IPR004182 -
Chna8g01059 240 Gene3D - 109 230 IPR011993 -
Chna8g01059 240 MobiDBLite consensus disorder prediction 1 30 - -
Chna8g01059 240 MobiDBLite consensus disorder prediction 7 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna8g01059 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr8:102182816 Chna9g02516 Chna-Chr9:128018354 dispersed
Chna Chna-Chr8:102182816 Chna8g02071 Chna-Chr8:164187331 wgd