AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chna8g01063 ATGGGTGCATCTGAGTCTATGGAAGCAATAGAAGACGAGGAACACGACGGATATAAGGAAGATATAGACGATCAAGGTGATTACGAAACAATAAAGTTATTGAGAAAAGATATGACAAATATTCTTGAACATGACCTTGAAATGACACCTTCTATATCGTCTTTGTCACCTCAATTATCATCTTTCGACACCCCACACATTGATCAAGCCATAAAGGATTCAAACCCTTTTGGCACGTCCAACATGACACGTAACTTCTCATTGGAATCATTAAATGATGATCGAACGACTGAGATATATGTGATATGTCATGGTGAATGTCACATGAAACTAAAGCCTGATTTGGTTAGTGGTAGGTGTCCTGAAGCTTCATTAACGCCAAATGGAAAAAGGCAATCAAGGGCATTGGCAGTGTTCTTGAAATCACAAGGGATTCGGTTTAATGCCATCTACACATCACCTTTAGACCGGGCTAGAGCAACCGCGATTCCTGAGATGAATTTTCCAGAGCACATGATACAAACGTCGGATGCACTACAAGATATGAGTCAAGGAACTTGGGAGGGTTGCCATCACTCGGATGTATATACCCCTTCAGTTGTAAGCATAATGGAGAGATTACAACCCGATTTTTGTGCACCCTCTGGAGAGACTCTAAGACAGGTGGAATTTCGAATGATGGAGTTTTTAAATGCAACAGTAACATGTTTGCCCGAAAACTTAAAATGTGATTTCCCCGCTTTAGATTCTGTTCCTCCACTACCCAAATTGGATTTATCAACAAGGCCTAGACTAGGAGCCCCCAAGAAAAAGTCAAGCAAGAGCCGACTACAAATGGTGCACACAAGTGCAGATCATGAGGCTGATGACGAGATGACCCCTCGAGTGCCTAGCAAGCATCGTGAACCTAAAGTGTTTCCTGAACCAATCATGGAAAAAATTAGCAACAACAGTAATAATCATGCCAACAATAACAACTCTCATCTTTCAACTGATTTGTCATGTTGTATAGGCATGTTTAGTCATTCGATACCTATCAAATGTCTAGTGACGGGTATCCTTGGTTGTAGTCCGACAATGTCCAACAAGATGTGCATAGAAGATTCGTCGATAACAGTGTTGCAATATTCCCAGAAAATGGGTTGGCAAATCAAAAGAGTGAACGATACTTGTCATCTGAGGCTTATGTAG 1191 41.14 MGASESMEAIEDEEHDGYKEDIDDQGDYETIKLLRKDMTNILEHDLEMTPSISSLSPQLSSFDTPHIDQAIKDSNPFGTSNMTRNFSLESLNDDRTTEIYVICHGECHMKLKPDLVSGRCPEASLTPNGKRQSRALAVFLKSQGIRFNAIYTSPLDRARATAIPEMNFPEHMIQTSDALQDMSQGTWEGCHHSDVYTPSVVSIMERLQPDFCAPSGETLRQVEFRMMEFLNATVTCLPENLKCDFPALDSVPPLPKLDLSTRPRLGAPKKKSSKSRLQMVHTSADHEADDEMTPRVPSKHREPKVFPEPIMEKISNNSNNHANNNNSHLSTDLSCCIGMFSHSIPIKCLVTGILGCSPTMSNKMCIEDSSITVLQYSQKMGWQIKRVNDTCHLRLM 396
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chna8g01063 396 SMART PGAM-5 98 349 IPR013078 -
Chna8g01063 396 Gene3D - 289 395 IPR029033 -
Chna8g01063 396 MobiDBLite consensus disorder prediction 1 22 - -
Chna8g01063 396 SUPERFAMILY Phosphoglycerate mutase-like 98 394 IPR029033 -
Chna8g01063 396 PANTHER PUTATIVE-RELATED 1 245 - -
Chna8g01063 396 MobiDBLite consensus disorder prediction 256 302 - -
Chna8g01063 396 CDD HP-PGM-like 98 180 IPR013078 -
Chna8g01063 396 Pfam Histidine phosphatase superfamily (branch 1) 99 234 IPR013078 -
Chna8g01063 396 MobiDBLite consensus disorder prediction 280 302 - -
Chna8g01063 396 Gene3D - 91 241 IPR029033 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chna8g01063 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chna Chna-Chr7:254092723 Chna8g01063 Chna-Chr8:102340426 dispersed