Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chna8g01065 | ATGTCCACAAATATTAACCTATATGGAGCTAATACAACCTACCATAGATCACTATACTCACACCAGCACCTGAGTTTTGCATCTTCAGTTGCGTCGTTTCGCGGAACGTGTAGAGTGGTTCAGGGTCGGGTTTCGTGTAGGGGGAGTGGGTTTAAGGTGGTTTGTAATGCGCAGAAAGTTGAGGTTCTTACTAGAAGTGAAAATGATATACGGGGTTTGGAAGGAGTGAGTAAGGAGTTGTCGTGTGTGATGAAGTTTGGTGGATCGTCTGTTGCGTCTGCTGAACGGATGAAAGAAGTGGCGGCTCTGATACTTAGGTTTCCGGAAGAAAGTCCGGTTATTGTTTTGTCTGCTATGGGCAAAACCACTAACAAGATTCTATTGGCTGGAGAGAAGGCTAAATGCGGCGAATCAGTTGTGGCTGAAATTAACGAATTGAGAGAACTCCACCATAGGACAGTGGATGAGCTTGGATTAGATAGATCGATCATTACATACCATTTAGAAAAATTAAAGCGACTTTTGGAAGTGATTGCTGAACTAAAAGAGTTTACACCACGTACAAGGGACTACCTAGTCTCATTTGGGGAGCGCATGTCCACAAGAATTTTTGCAGCATATTTAAATAAACTAGGTGTCAAAGCCCGCCAATATGATGCATTTGAAATTGGCTTCATAACAACAGATGACTTTACTAATGCGGATATTTTGGAAGAAACATATCCAGCTGTTGCAGAGAGACTTAATGGTGATTGGTTTAAGGATCCTGCAATTCCTATTGTCACTGGCTTTCTTGGAAAGGGCAAGAAAACTGGTGATGTGACAACATTGGGCAGAGGTGGCAGTGATTTGACTGCCACCACCATTGGTAAAGCTCTTGGGTTGCGAGAAATTCAGGTATGGAAAGATGTAGATGGTGTCTTGACATGTGACCCAAATATACACAAGGGTGCAGAACCTGTGCCATATTTGACTTTTGATGAGGCAGCTGAACTTGCATATTTTGGTGCCCAGGTCCTACATCCTCAGTCTATGAGGCCTGCAAGAGAGGGTGACATACCTGTTAGGGTTAAAAATTCGTATAACCCTAATGCTCCTGGTACCCTAATCACTAAATCAAGAGATATGAGTAAGGCAGTACTAACCAGCATTGTTTTGAAACGTAATGTAACTATGTTAGACATCGTTAGCACTCGCATGCTTGGCCAATTTGGATTCCTAGCTAAGGTTTTCTCAATTTTTGAGGACTTGGGTATATCCGTGGATGTTGTAGCTACTAGTGAAGTTAGCATTTCCCTAACGTTAGATCCTTCAAAGCTGTGGAGCAGGGAGTTGATTCAGCAGGCAAGCGAACTTGATCATGTTGTGGAAGAACTTGAAAAAATTGCTAAAGTGAATCTCCTGCAACATAGATCGATTATTTCACTCATTGGGAATGTTCAGAGGTCCTCACTTGTATTGGAAAAGGCATTTCGTGTTCTTCGTGTGAATGGAGTGAATGTTCAGATGATATCACAAGGAGCATCGAAGGTGAATATATCACTTATAGTAAATGACAGTGAATCAGAAAAATGCGTGAGAGCTCTGCATTCGGCTTTCTTTGAGGATGATATGTCTGATATCAACTGA | 1629 | 42.05 | MSTNINLYGANTTYHRSLYSHQHLSFASSVASFRGTCRVVQGRVSCRGSGFKVVCNAQKVEVLTRSENDIRGLEGVSKELSCVMKFGGSSVASAERMKEVAALILRFPEESPVIVLSAMGKTTNKILLAGEKAKCGESVVAEINELRELHHRTVDELGLDRSIITYHLEKLKRLLEVIAELKEFTPRTRDYLVSFGERMSTRIFAAYLNKLGVKARQYDAFEIGFITTDDFTNADILEETYPAVAERLNGDWFKDPAIPIVTGFLGKGKKTGDVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIHKGAEPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITKSRDMSKAVLTSIVLKRNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKLWSRELIQQASELDHVVEELEKIAKVNLLQHRSIISLIGNVQRSSLVLEKAFRVLRVNGVNVQMISQGASKVNISLIVNDSESEKCVRALHSAFFEDDMSDIN | 542 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chna8g01065 | 542 | SUPERFAMILY | Carbamate kinase-like | 83 | 373 | IPR036393 | - | |
| Chna8g01065 | 542 | Gene3D | - | 83 | 370 | IPR036393 | - | |
| Chna8g01065 | 542 | Gene3D | - | 382 | 534 | - | - | |
| Chna8g01065 | 542 | Pfam | Amino acid kinase family | 82 | 359 | IPR001048 | - | |
| Chna8g01065 | 542 | FunFam | Aspartokinase | 391 | 464 | - | - | |
| Chna8g01065 | 542 | FunFam | Aspartokinase | 120 | 212 | - | - | |
| Chna8g01065 | 542 | NCBIfam | aspartate kinase | 83 | 535 | IPR001341 | GO:0004072(InterPro)|GO:0008652(InterPro) | |
| Chna8g01065 | 542 | FunFam | Aspartokinase 1 | 465 | 534 | - | - | |
| Chna8g01065 | 542 | SUPERFAMILY | ACT-like | 462 | 537 | IPR045865 | - | |
| Chna8g01065 | 542 | Coils | Coil | 442 | 462 | - | - | |
| Chna8g01065 | 542 | ProSiteProfiles | ACT domain profile. | 395 | 475 | IPR002912 | - | |
| Chna8g01065 | 542 | Pfam | ACT domain | 474 | 533 | IPR054352 | - | |
| Chna8g01065 | 542 | FunFam | Aspartokinase | 185 | 370 | - | - | |
| Chna8g01065 | 542 | ProSitePatterns | Aspartokinase signature. | 83 | 91 | IPR018042 | GO:0004072(InterPro)|GO:0008652(InterPro) | |
| Chna8g01065 | 542 | PANTHER | ASPARTATE KINASE | 80 | 535 | - | GO:0004072(PANTHER)|GO:0005829(PANTHER)|GO:0009089(PANTHER)|GO:0009090(PANTHER)|GO:0009570(PANTHER) | |
| Chna8g01065 | 542 | Gene3D | Aspartokinase, catalytic domain | 120 | 212 | IPR042199 | - | |
| Chna8g01065 | 542 | Gene3D | - | 391 | 468 | - | - | |
| Chna8g01065 | 542 | SUPERFAMILY | ACT-like | 379 | 479 | IPR045865 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chna8g01065 | K00928 | aspartate kinase [EC:2.7.2.4] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chna | Chna-Chr8:102401096 | Chna9g01895 | Chna-Chr9:81411217 | dispersed |