AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich2g01174 ATGGAATTCTGGGTGGTTGCAGCGGCTACTGGTGCCGGTTACGTGGCCAAGCACTGGCAGAACTTATCGGGAGAGAAAGATGGCTCATCGAAGCAGTCACCTCTACCGTCACCACGCCTGCAATCAGACGCACGCCAAGTGTTCGATAAAATGCCTAACTCAGTTTTCCCATTGCCAAAGTTAGCTAGAAGATGCTTATTAGATAAAGAAGATGTCGATCATGTTTCAAATTCGGCTCCAACCTTTATCGATAAACAAGTAGATCAAGATCACGCGAATGAAATCAACAGAACACAAGAGAATCGTTCCTACAAATTCAGAACGAAGAACATCAACATCAAATCGAATCTGAAGCCCTTAGTGGTAACTGGTGACAACAAAGATCTGAAAGATCGTAAGGTCGTGTTCATGGAAGAAAAAGAAAACGGGGCGTGTATAGACACATCATTGTTCGCACCAATTGGATCAATGAAACTTCCAACAAAACCGAAAGAAAAGTTCGACACAAGCAACGACATGGTATCCTTGTTTATTGGGATCACAATCGGCATATTATCAACTACCATGACTAATCAACACGAAATCGAGTATCTAAATGATCTGCTAGAACAAGCTGAGAATATGGTTCGAGATCTACACAATAAACTTGAAAAGAAAGACGGATTTACCACGAAGAAGCTTTACACCGAACCAAATGAAATCGATAGTCCAAAAACCGAGAAGTTTGAGTTAACGAGTGATATTGAGGCTGAACTTGAAGCTGAGTTGGAGCGATTGGAAGAAAATATGAAGGGTTGCACCATGCAAAGATTGTCTAATGTTGTAGAGATTGATTCGGACTTTGAAGCGGACATGGCTAGAGGAGATTTAAACCTAGACACGGTCAATTGGGAACTCGATAGTCAATCCGAATCAGACCCCAGGGGCAAAACCGTCAAAAGTAGCGAAAGTGACCGCGCCATGAACCCCGTTTTCACACCAAACTACGCGGTTTCATCGTTAGACTTACGGTTACGCCTTCACGAAGTAATCGAATCCAACCTCCAAGCACGTATCAATGAACTCGAGTCACTTCTCAAGAACCAAAATACCCAAAATAACCCTCGTTCACCGGACCCACAAGAGGAAAACTCTTTTTGGGACTTTGATCATACAAGATTCGAATCTTTTTCATCAACCCCTTAA 1185 42.62 MEFWVVAAATGAGYVAKHWQNLSGEKDGSSKQSPLPSPRLQSDARQVFDKMPNSVFPLPKLARRCLLDKEDVDHVSNSAPTFIDKQVDQDHANEINRTQENRSYKFRTKNINIKSNLKPLVVTGDNKDLKDRKVVFMEEKENGACIDTSLFAPIGSMKLPTKPKEKFDTSNDMVSLFIGITIGILSTTMTNQHEIEYLNDLLEQAENMVRDLHNKLEKKDGFTTKKLYTEPNEIDSPKTEKFELTSDIEAELEAELERLEENMKGCTMQRLSNVVEIDSDFEADMARGDLNLDTVNWELDSQSESDPRGKTVKSSESDRAMNPVFTPNYAVSSLDLRLRLHEVIESNLQARINELESLLKNQNTQNNPRSPDPQEENSFWDFDHTRFESFSSTP 394
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich2g01174 394 MobiDBLite consensus disorder prediction 298 320 - -
Cich2g01174 394 MobiDBLite consensus disorder prediction 23 42 - -
Cich2g01174 394 Coils Coil 242 269 - -
Cich2g01174 394 PANTHER EMB|CAB62613.1 1 363 IPR040348 GO:0008356(InterPro)
Cich2g01174 394 MobiDBLite consensus disorder prediction 361 394 - -
Cich2g01174 394 Coils Coil 345 365 - -
Cich2g01174 394 Coils Coil 195 218 - -
Cich2g01174 394 MobiDBLite consensus disorder prediction 23 40 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich2g01174 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1640990 Cich Cich2g01174 Cich-Chr2:39248529 Cich3g03495 Cich-Chr3:67409004