AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich2g01181 ATGCTACTCGCACTCCTATTTCTCGGAACATGGCCGGCGATTTTAACTCTGTTAGAAAGACGTGGCCGACTTCCTCAACACACGTATCTTGATTACACAATCACCAATCTTCTGGCCGCTGTCATAATCGCTTTCACATTTGGGGAATTTGGCCATACCAACGATGGTAAACCCAATTTCCTAATCCAGCTTTCTCAGAATAACTGGCCAAGCGTTATGTTTGCAATGGCCGGTGGAGTGGTTTTAAGCCTCGGAAATTTGTCGACACAATACGCTTGGGCATTTGTCGGTTTATCGGTAACTGAAGTCATCACTTCAAGTATTACCGTTGTCATAGGTACAACTTTGAACTACTTTTTAGATGACAAAATCAACAGAGCCGAGATACTTTTCCCCGGGGTCGCGTGTTTCTTAATCGCTGTTTGTCTTGGTTCATTAGTGCATGCATCCAATGCGAAAGATAATAAAAGAAAGCTTGATAAATTACAAGGATCTCAAATTGGCGAAAACGGATCAATTGGTAATGGGTCAAAAACGACATCAAAAAAGGATCCGGAGAGTGGAACTAGTAAAGTAGAAAAGGCAAAAGCAGGAACCGCTAGTTTTCTTATTGAACTCGAGAACCGAAGATCAATCAAGGTGTTTGGAAGAAGCACATTGATCGGTTTGGTGATATGTTTATTTGCGGGAATTTGTTTCTCTCTCTTCTCTCCCGCATTTAACCTTGCAACCAACGACCAATGGAATACATTAGACAAAGGTGTACCTCACTTAAGTGTGTACACAGCCTTTTTCTATTTTTCTTGCTCGTGTTTTGTAATCGCCATAATTTTAAACATAACATTTCTTTACCGCCCGGCATTCAACTTGCCAAAGTCTTCAATCAAAGCATATTTAAATGACTGGGAAGGCCGAGGTTGGGCCTTTCTGGCGGGTTTTTTGTGTGGTTTTGGAAATGGCCTCCAATTTATGGGAGGCCAAGCTGCCGGTTATGCTGCAGCTGACGCAGTTCAGGCGCTTCCACTTGTGAGTACCTTTTGGGGTGTGATCTTTTTTGGTGAATACAGAAAGTCATCGAAGAGAACATATGTGTTACTTGTAGGAATGTTGTCTATGTTTATTGTGGCTGTTGGAGTTCTAATGGCGTCATCTGGCCACCGCAAACATTAA 1170 42.31 MLLALLFLGTWPAILTLLERRGRLPQHTYLDYTITNLLAAVIIAFTFGEFGHTNDGKPNFLIQLSQNNWPSVMFAMAGGVVLSLGNLSTQYAWAFVGLSVTEVITSSITVVIGTTLNYFLDDKINRAEILFPGVACFLIAVCLGSLVHASNAKDNKRKLDKLQGSQIGENGSIGNGSKTTSKKDPESGTSKVEKAKAGTASFLIELENRRSIKVFGRSTLIGLVICLFAGICFSLFSPAFNLATNDQWNTLDKGVPHLSVYTAFFYFSCSCFVIAIILNITFLYRPAFNLPKSSIKAYLNDWEGRGWAFLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGVIFFGEYRKSSKRTYVLLVGMLSMFIVAVGVLMASSGHRKH 389
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich2g01181 389 MobiDBLite consensus disorder prediction 165 193 - -
Cich2g01181 389 Pfam Ureide permease 28 383 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
Cich2g01181 389 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 1 388 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0071705(InterPro)
Cich2g01181 389 MobiDBLite consensus disorder prediction 165 183 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich2g01181 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr2:39396903 Cich2g01182 Cich-Chr2:39475167 tandem